RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MDFIQ99750 246 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 RAB1BQ9H0U4 201 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 MYEF2Q9P2K5 600 aaKnown RBP12.61□□□□□ -0.39
FANCA-220ENST00000566409 CMAHPQ9Y471 501 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 A0A087WUU8 490 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 IGHV4-61A0A0C4DH41 118 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 LOC390937A0A1W2PQ73 354 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 NPIPB13A6NJU9 1138 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
FANCA-220ENST00000566409 VSTM5A8MXK1 200 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 NPIPB4C9JG80 1138 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 MCIDASD6RGH6 385 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 NDUFS8O00217 210 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 DRD4P21917 467 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 CDAP32320 146 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 EVX1P49640 407 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 DAP3P51398 398 aaKnown RBP12.6□□□□□ -0.39
FANCA-220ENST00000566409 PSME3P61289 254 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 PRKCDQ05655 676 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 CARTPTQ16568 116 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 IFI44LQ53G44 452 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
FANCA-220ENST00000566409 NABP1Q96AH0 204 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 FNDC11Q9BVV2 318 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 FZR1Q9UM11 496 aa12.6□□□□□ -0.39
FANCA-220ENST00000566409 HTR3EA5X5Y0 456 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 LYNX1G3V0Z9 82 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 CDC42EP2O14613 210 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 GSTA4O15217 222 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 SNX3O60493 162 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 FARS2O95363 451 aaKnown RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 STAMBPO95630 424 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 IGHMP01871 453 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 LYNX1P0DP58 116 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 DAOP14920 347 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 ZNF26P17031 533 aaPredicted RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 GIFP27352 417 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 MRPS34P82930 218 aaKnown RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 GGTLC2Q14390 218 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 TRAM2Q15035 370 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 LRRC18Q8N456 261 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 SLC30A7Q8NEW0 376 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 OR51A7Q8NH64 312 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 PIMREGQ9BSJ6 248 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 BPESC1Q9GZL8 116 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 TPK1Q9H3S4 243 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 MYOZ1Q9NP98 299 aaPredicted RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 EGFL7Q9UHF1 273 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 FBXL3Q9UKT7 428 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
FANCA-220ENST00000566409 SPEF1Q9Y4P9 236 aa12.59□□□□□ -0.39
FANCA-220ENST00000566409 SYNGR3O43761 229 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 MGRN1O60291 552 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 SAGP10523 405 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 LSP1P33241 339 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 ALDH3B1P43353 468 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 ZNF84P51523 738 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 GYS2P54840 703 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 CTXN1P60606 82 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 ERVS71-1P61550 626 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 GALK2Q01415 458 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 TOP3AQ13472 1001 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 MAD2L1BPQ15013 274 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 SLC36A2Q495M3 483 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 CYB5R2Q6BCY4 276 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 TMEM53Q6P2H8 277 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 MBOAT2Q6ZWT7 520 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 FKBP9P1Q75LS8 142 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 HDDC2Q7Z4H3 204 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 RNF113BQ8IZP6 322 aaKnown RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 ZNF786Q8N393 782 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 RNF148Q8N7C7 305 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 FAM86B1Q8N7N1 296 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 ZNF519Q8TB69 540 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 NEU4Q8WWR8 484 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 ACOT11Q8WXI4 607 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 NSMAFQ92636 917 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 SOX7Q9BT81 388 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 RNF121Q9H920 327 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 NMNAT1Q9HAN9 279 aaPredicted RBP12.58□□□□□ -0.4
FANCA-220ENST00000566409 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
FANCA-220ENST00000566409 DYNLRB1Q9NP97 96 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms