RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 A0A1W2PPW3 197 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 FBP2O00757 339 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 CDC14BO60729 498 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 BGLAPP02818 100 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 KLF3P57682 345 aaPredicted RBP10.84□□□□□ -0.67
RNF40-208ENST00000565995 SELENOVP59797 346 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 CAMK2DQ13557 499 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 NKPD1Q17RQ9 610 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 COQ5Q5HYK3 327 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 AVPI1Q5T686 147 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 TMEM154Q6P9G4 183 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 FGFBP3Q8TAT2 258 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 SYNPRQ8TBG9 265 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 RAB1CQ92928 201 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 POP5Q969H6 163 aaKnown RBP10.84□□□□□ -0.67
RNF40-208ENST00000565995 TMEM19Q96HH6 336 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 C1orf147Q96MC9 270 aaPredicted RBP10.84□□□□□ -0.67
RNF40-208ENST00000565995 GPA33Q99795 319 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 TPT1P8Q9HAU6 139 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 GID8Q9NWU2 228 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
RNF40-208ENST00000565995 PPIAL4AQ9Y536 164 aa10.84□□□□□ -0.67
RNF40-208ENST00000565995 B2RBV5 119 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 CLDN25C9JDP6 229 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 CLDN34H7C241 214 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 RNASE1P07998 156 aaKnown RBP10.83□□□□□ -0.68
RNF40-208ENST00000565995 BMP2P12643 396 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 CRATP43155 626 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 IL13RA1P78552 427 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 HOXC5Q00444 222 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 MOGQ16653 247 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 RPS26P11Q5JNZ5 115 aaPredicted RBP10.83□□□□□ -0.68
RNF40-208ENST00000565995 PAGE3Q5JUK9 113 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 ULK3Q6PHR2 472 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 C16orf89Q6UX73 402 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
RNF40-208ENST00000565995 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 SLC22A24Q8N4F4 322 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 PAQR4Q8N4S7 273 aaPredicted RBP10.83□□□□□ -0.68
RNF40-208ENST00000565995 SIGLECL1Q8N7X8 197 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 SNX33Q8WV41 574 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 C11orf40Q8WZ69 217 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 GTF2H4Q92759 462 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 TIMD4Q96H15 378 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 TSPAN32Q96QS1 320 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 ULBP2Q9BZM5 246 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 C1orf198Q9H425 327 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 UNKLQ9H9P5 680 aaKnown RBP10.83□□□□□ -0.68
RNF40-208ENST00000565995 MED29Q9NX70 200 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 RPS6KB2Q9UBS0 482 aa10.83□□□□□ -0.68
RNF40-208ENST00000565995 A0A1B0GWA3 101 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ZNF726A6NNF4 738 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 PLPP3O14495 311 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ENTPD5O75356 428 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ATP5HO75947 161 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 MFN2O95140 757 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ADH4P08319 380 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 OR8G3PP0DMU2 310 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ETS2P15036 469 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 NQO1P15559 274 aaKnown RBP10.82□□□□□ -0.68
RNF40-208ENST00000565995 HTR2AP28223 471 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 PRKAR1BP31321 381 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 RAD52P43351 418 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 RASSF2P50749 326 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 UCP2P55851 309 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 PUDPQ08623 228 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 BNIP1Q12981 228 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 HFEQ30201 348 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 NRN1LQ496H8 165 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 GTDC1Q4AE62 458 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
RNF40-208ENST00000565995 WDR88Q6ZMY6 472 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 USP51Q70EK9 711 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 DPP10Q8N608 796 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 DEFB108BQ8NET1 73 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 OR6N1Q8NGY5 312 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 C22orf15Q8WYQ4 148 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 SLC47A1Q96FL8 570 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 BCL2L14Q9BZR8 327 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 A4GALTQ9NPC4 353 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 DECR2Q9NUI1 292 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 PLEK2Q9NYT0 353 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 NUP50Q9UKX7 468 aa10.82□□□□□ -0.68
RNF40-208ENST00000565995 TMEM247A6NEH6 219 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 GYG2O15488 501 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 MGRN1O60291 552 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 PTHP01270 115 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 FAM157BP0CG42 384 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 T-ENOLP0DO92 83 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms