RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MAPK11Q15759 364 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DUSP7Q16829 419 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 HSD17B12Q53GQ0 312 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SYT14P1Q58G82 188 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ARMC4Q5T2S8 1044 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DCAF12Q5T6F0 453 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 HACD4Q5VWC8 232 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TRIM40Q6P9F5 258 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TMPRSS11AQ6ZMR5 421 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NANOGNBQ7Z5D8 188 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 HS3ST5Q8IZT8 346 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 APCDD1Q8J025 514 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 HCAR2Q8TDS4 363 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 MND1Q9BWT6 205 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SLC17A9Q9BYT1 436 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 VN1R1Q9GZP7 353 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 UBTD1Q9HAC8 227 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TPT1P8Q9HAU6 139 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PHPT1Q9NRX4 125 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TAS2R9Q9NYW1 312 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 LHX3Q9UBR4 397 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 APOBEC3BQ9UH17 382 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CRLS1Q9UJA2 301 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 POU2F3Q9UKI9 436 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 MGAT4BQ9UQ53 548 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ANGPT4Q9Y264 503 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CAB39Q9Y376 341 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 RPL36Q9Y3U8 105 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF670-ZNF695F2Z2N8 137 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 GFYI3L273 518 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PSMD11O00231 422 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CCNB2O95067 398 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TNFP01375 233 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TRBC1P01850 177 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 HLA-DQB1P01920 261 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 DANCRP0C864 163 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PSMA1P25786 263 aaKnown RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PKLRP30613 574 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RRM2P31350 389 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 LSM3P62310 102 aaKnown RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 HMGCS1Q01581 520 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CNTN1Q12860 1018 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 SLC25A53Q5H9E4 307 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ATAD3CQ5T2N8 411 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CPTPQ5TA50 214 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CCDC71Q8IV32 467 aaPredicted RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RDH10Q8IZV5 341 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 KRTCAP2Q8N6L1 136 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PROKR2Q8NFJ6 384 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 OR13A1Q8NGR1 328 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 FCAMRQ8WWV6 532 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 MGLLQ99685 303 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 LMF2Q9BU23 707 aaKnown RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PRRG3Q9BZD7 231 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ASB8Q9H765 288 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 EVA1AQ9H8M9 152 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ZBTB20Q9HC78 741 aaPredicted RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 SDF2L1Q9HCN8 221 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 VPS29Q9UBQ0 182 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 SSR3Q9UNL2 185 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PROCRQ9UNN8 238 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 N6AMT1Q9Y5N5 214 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF462Q96JM2 2506 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TRIOO75962 3097 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 SCN8AQ9UQD0 1980 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 LOC100509620A0A075B734 347 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CCDC182A6NF36 153 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 E9PI62 339 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 KIAA0513O60268 411 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TBX19O60806 448 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 IGSF6O95976 241 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RAB40ALP0C0E4 278 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PIRTP0C851 137 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 IL7P13232 177 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 LIFP15018 202 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CPN2P22792 545 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CD70P32970 193 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CA5AP35218 305 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PDX1P52945 283 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RHOAP61586 193 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PPP3R1P63098 170 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 IL1RL1Q01638 556 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 BCL2L1Q07817 233 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ST3GAL4Q11206 333 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 COX10Q12887 443 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PTPRCAPQ14761 206 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RGNQ15493 299 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 GTDC1Q4AE62 458 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TCTE1Q5JU00 501 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PIP5KL1Q5T9C9 394 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 MMD2Q8IY49 270 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 OR4D9Q8NGE8 314 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PIH1D2Q8WWB5 315 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 SSMEM1Q8WWF3 244 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 UBE2E3Q969T4 207 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 PYCR2Q96C36 320 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 AP2M1Q96CW1 435 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 C11orf24Q96F05 449 aaPredicted RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms