RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 ZDHHC21Q8IVQ6 265 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 FAM86B1Q8N7N1 296 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 Q96MF0 132 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 DLL4Q9NR61 685 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 GRHPRQ9UBQ7 328 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 ZNF346Q9UL40 294 aaKnown RBP11.64□□□□□ -0.55
CLK3-216ENST00000564468 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 SPEF1Q9Y4P9 236 aa11.64□□□□□ -0.55
CLK3-216ENST00000564468 AHCYL1O43865 530 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 KRT36O76013 467 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 DIRAS1O95057 198 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 NDUFB2O95178 105 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 CD14P08571 375 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 T-ENOLP0DO92 83 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 FUT4P22083 530 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 CDKN1AP38936 164 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 PTDSS1P48651 473 aaKnown RBP11.63□□□□□ -0.55
CLK3-216ENST00000564468 MYBPC1Q00872 1141 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 PIGFQ07326 219 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 RAB35Q15286 201 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 C11orf71Q6IPW1 123 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 RINLQ6ZS11 566 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 DHFR2Q86XF0 187 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 ARIH2OSQ8N7S6 290 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 LRRC75AQ8NAA5 344 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 OR4K5Q8NGD3 323 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 OR13C2Q8NGS9 318 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 OR52J3Q8NH60 311 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 HDAC2Q92769 488 aaKnown RBP11.63□□□□□ -0.55
CLK3-216ENST00000564468 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
CLK3-216ENST00000564468 C18orf12Q96KH6 178 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 CACNG6Q9BXT2 260 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 C1orf198Q9H425 327 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 RNF121Q9H920 327 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 CA10Q9NS85 328 aa11.63□□□□□ -0.55
CLK3-216ENST00000564468 NSD1Q96L73 2696 aaPredicted RBP11.62□□□□□ -0.55
CLK3-216ENST00000564468 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 TRBV4-1A0A0J9YWV2 114 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 SH3PXD2BA1X283 911 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 ZNF503-AS2A6NEH8 195 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 B9A039 149 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 XKRYO14609 159 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 CDC42EP2O14613 210 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 ZNF14P17017 642 aaPredicted RBP11.62□□□□□ -0.55
CLK3-216ENST00000564468 OMPP47874 163 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 GIPRP48546 466 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 SNRPD2P62316 118 aaKnown RBP11.62□□□□□ -0.55
CLK3-216ENST00000564468 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
CLK3-216ENST00000564468 PLP2Q04941 152 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 IQCCQ4KMZ1 466 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 GPR139Q6DWJ6 353 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 LCN8Q6JVE9 175 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 CYP2R1Q6VVX0 501 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 IGFN1Q86VF2 1251 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 MEX3DQ86XN8 651 aaKnown RBP11.62□□□□□ -0.55
CLK3-216ENST00000564468 SKA3Q8IX90 412 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 LINC00471Q8N535 108 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 LRGUKQ96M69 825 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 MAGIXQ9H6Y5 334 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 ZNF442Q9H7R0 627 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 SIAEQ9HAT2 523 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 TAS2R1Q9NYW7 299 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 ZNF224Q9NZL3 707 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 SIGLEC7Q9Y286 467 aa11.62□□□□□ -0.55
CLK3-216ENST00000564468 UNC119BA6NIH7 251 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 H7C417 338 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 OR10H3O60404 316 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 PTP4A3O75365 173 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 SERPINA5P05154 406 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 CELA3BP08861 270 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 CALCRP30988 508 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 RRM2P31350 389 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 SERPINF1P36955 418 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 LIMS1P48059 325 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 ERVK-25P63136 954 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 GALK2Q01415 458 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 FHL1Q13642 323 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 DAG1Q14118 895 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 DNAL1Q4LDG9 190 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
CLK3-216ENST00000564468 SLC25A47Q6Q0C1 308 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 OR1J2Q8NGS2 313 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 ZNF519Q8TB69 540 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 ASB9Q96DX5 294 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 FBXO17Q96EF6 278 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
CLK3-216ENST00000564468 ZNF75AQ96N20 296 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 TSPAN32Q96QS1 320 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
CLK3-216ENST00000564468 SH3GL3Q99963 347 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 FUZQ9BT04 418 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 THTPAQ9BU02 230 aa11.61□□□□□ -0.55
CLK3-216ENST00000564468 TRIM15Q9C019 465 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms