RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ZFP62Q8NB50 900 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-208ENST00000563220 OR6N2Q8NGY6 317 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 CHPT1Q8WUD6 406 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 COX4I2Q96KJ9 171 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 ADAD1Q96M93 576 aaKnown RBP16.09■□□□□ 0.17
COMMD4-208ENST00000563220 NAA11Q9BSU3 229 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-208ENST00000563220 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 TRIM36Q9NQ86 728 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 GRIP1Q9Y3R0 1128 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 KCNMB2Q9Y691 235 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 PSMD9O00233 223 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 MPZL1O95297 269 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 HLA-DQA2P01906 255 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 GABRA5P31644 462 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 HYAL4Q2M3T9 481 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF684Q5T5D7 378 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 USP43Q70EL4 1123 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 OR6X1Q8NH79 312 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 OR2V1Q8NHB1 315 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 S100ZQ8WXG8 99 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 PELI1Q96FA3 418 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 SLC25A44Q96H78 314 aaPredicted RBP16.08■□□□□ 0.17
COMMD4-208ENST00000563220 ING1Q9UK53 422 aaPredicted RBP16.08■□□□□ 0.17
COMMD4-208ENST00000563220 SSR3Q9UNL2 185 aa16.08■□□□□ 0.17
COMMD4-208ENST00000563220 DCHS1Q96JQ0 3298 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 CLDN25C9JDP6 229 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF593O00488 134 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 SMAD9O15198 467 aaKnown RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 CXCL13O43927 109 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 PGA4P0DJD7 388 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 PGA3P0DJD8 388 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ALOX5APP20292 161 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 PTGS2P35354 604 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ACTA2P62736 377 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 PPIAP62937 165 aaKnown RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ACTG2P63267 376 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 FABP5Q01469 135 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 HSF2Q03933 536 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 GPR50Q13585 617 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 SLC17A1Q14916 467 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 MEP1BQ16820 701 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 CREB3L2Q70SY1 520 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 OR10D3Q8NH80 312 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 ABTB1Q969K4 478 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 DCLRE1CQ96SD1 692 aaKnown RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 TMED9Q9BVK6 235 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 WDR12Q9GZL7 423 aaKnown RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 SLC6A15Q9H2J7 730 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 HMG20AQ9NP66 347 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 TXNL4BQ9NX01 149 aaKnown RBP16.08■□□□□ 0.16
COMMD4-208ENST00000563220 WASF3Q9UPY6 502 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 PMF1-BGLAPU3KQ54 211 aa16.08■□□□□ 0.16
COMMD4-208ENST00000563220 SPTBN2O15020 2390 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 LINC01387J3KSC0 135 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 MAGEB3O15480 346 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 DNPH1O43598 174 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 SULT1C4O75897 302 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 VAMP5O95183 116 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 SERPINB10P48595 397 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 BLVRAP53004 296 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 CLDN17P56750 224 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 POU4F3Q15319 338 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 DGUOKQ16854 277 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 CARD17Q5XLA6 110 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 CD200R1LQ6Q8B3 271 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 ASB18Q6ZVZ8 466 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF554Q86TJ5 538 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
COMMD4-208ENST00000563220 RBP7Q96R05 134 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 AKIP1Q9NQ31 210 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 GNG8Q9UK08 70 aa16.07■□□□□ 0.16
COMMD4-208ENST00000563220 KHDRBS3O75525 346 aaKnown RBP16.06■□□□□ 0.16
COMMD4-208ENST00000563220 CEACAM4O75871 244 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 IGHG1P01857 330 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 OPRL1P41146 370 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 EIF1AXP47813 144 aaKnown RBP16.06■□□□□ 0.16
COMMD4-208ENST00000563220 LHX2P50458 406 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 TUBA1BP68363 451 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 GLO1Q04760 184 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 INSL4Q14641 139 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 RNFT1Q5M7Z0 435 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 TUBA1AQ71U36 451 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 TRILQ7L0X0 811 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 TMEM178AQ8NBL3 297 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 KBTBD8Q8NFY9 601 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 OR9K2Q8NGE7 335 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 NSMAFQ92636 917 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 HDHD5Q9BXW7 423 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 ACOXLQ9NUZ1 547 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 ST6GALNAC2Q9UJ37 374 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 KCNG2Q9UJ96 466 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 LAMP5Q9UJQ1 280 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 LOC400499M0QZD8 3231 aa16.06■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF726A6NNF4 738 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 PLPP2O43688 288 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 ITGB2P05107 769 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 CAPZA2P47755 286 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms