RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 FKRPQ9H9S5 495 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 FGF22Q9HCT0 170 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 PRICKLE3O43900 615 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 KLF8O95600 359 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 RAB40ALP0C0E4 278 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 SBK2P0C263 348 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 CLUP10909 449 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 GTF2F2P13984 249 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 AK4P27144 223 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 ADPRHP54922 357 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 ST3GAL3Q11203 375 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 ENPP2Q13822 863 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 TMEM244Q5VVB8 128 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 FRMD1Q8N878 549 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 OR8S1Q8NH09 359 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 RAB40AQ8WXH6 277 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 AIF1LQ9BQI0 150 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 GPR55Q9Y2T6 319 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 ACOD1A6NK06 481 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 MCIDASD6RGH6 385 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 RNASEK-C17orf49H0YIS7 233 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 TMPRSS11DO60235 418 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 EML2O95834 649 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 CD74P04233 296 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 ITPKBP27987 946 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 NTSR1P30989 418 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 MAGEB1P43366 347 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 AIMP2Q13155 320 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 YOD1Q5VVQ6 348 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 CCL4L1Q8NHW4 92 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 DVL3Q92997 716 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 SMIM19Q96E16 107 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 MISP3Q96FF7 219 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 CAMK1GQ96NX5 476 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 SIRT3Q9NTG7 399 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
GTF3C1-203ENST00000562609 H7C417 338 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 PMS2P2O95744 297 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CHRM4P08173 479 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 ZGLP1P0C6A0 271 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 FUT1P19526 365 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 S100A2P29034 98 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 HOXA6P31267 233 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 GLP1RP43220 463 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 VWA2Q5GFL6 755 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 FAM111BQ6SJ93 734 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 OR2A1Q8NGT9 310 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 TMEM255BQ8WV15 326 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 DIO2Q92813 273 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 C1QTNF2Q9BXJ5 285 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 MS4A8Q9BY19 250 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 MTFP1Q9UDX5 166 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 TRBV2A0A0J9YWF9 115 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 PIN1P1O15428 100 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 TPT1P13693 172 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 DDTP30046 118 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 BSGP35613 385 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CDK5R1Q15078 307 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 ZNF311Q5JNZ3 666 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 OR52E1Q8NGJ3 308 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 UBE2E3Q969T4 207 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 TM4SF18Q96CE8 201 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SOX7Q9BT81 388 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SELENOIQ9C0D9 397 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 LMAN2LQ9H0V9 348 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 S1PR5Q9H228 398 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 ADGRL4Q9HBW9 690 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 NEUROD4Q9HD90 331 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A087X0M5 115 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A1B0GX30 115 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 IFITM10A6NMD0 228 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 IDSB3KWA1 339 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 AGPAT2O15120 278 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 RPN2P04844 631 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SNRNP70P08621 437 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 DAOP14920 347 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CTHP32929 405 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 PMELP40967 661 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 ANXA11P50995 505 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CAV2P51636 162 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CSNK1G2P78368 415 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 BAP18Q8IXM2 172 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms