RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PYDC1Q8WXC3 89 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 RASD2Q96D21 266 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 OSBPL10Q9BXB5 764 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 GRHPRQ9UBQ7 328 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 IL20RAQ9UHF4 553 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 BAIAP2Q9UQB8 552 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 IER3IP1Q9Y5U9 82 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 MAST4O15021 2626 aa11.72□□□□□ -0.53
CDH1-204ENST00000562118 DPRXA6NFQ7 191 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 E9PQ18 207 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 GNGT2O14610 69 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 SLC2A10O95528 541 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 PPP1R3DO95685 299 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
CDH1-204ENST00000562118 DAPP51397 102 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 KRTAP10-9P60411 292 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 PPP2R2BQ00005 443 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 FMODQ06828 376 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 KDM4DQ6B0I6 523 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 DPPA2Q7Z7J5 298 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 ZBTB46Q86UZ6 589 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 SLC22A24Q8N4F4 322 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 SYT14Q8NB59 555 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 NPEPL1Q8NDH3 523 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 OR4Q3Q8NH05 313 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 IGFBPL1Q8WX77 278 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
CDH1-204ENST00000562118 MUCL1Q96DR8 90 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
CDH1-204ENST00000562118 OTOGQ6ZRI0 2925 aa11.71□□□□□ -0.54
CDH1-204ENST00000562118 IGLV1-36A0A0B4J1U3 117 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 CASKO14936 926 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 ARHGEF9O43307 516 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 ENTPD5O75356 428 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 E2F6O75461 281 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 WNT11O96014 354 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 IGFBP1P08833 259 aaPredicted RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 MMP7P09237 267 aaPredicted RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 OSMP13725 252 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 B4GALT1P15291 398 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 CBR1P16152 277 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 CTLA4P16410 223 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 NPR2P20594 1047 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 CDK5Q00535 292 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 KCNMB1Q16558 191 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 FAM27BQ5VT28 67 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 ZNF813Q6ZN06 617 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 WFDC8Q8IUA0 241 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 OR2T33Q8NG76 320 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 OR52L1Q8NGH7 329 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 ZC3HAV1LQ96H79 300 aaKnown RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 ERMAPQ96PL5 475 aaPredicted RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 RBP7Q96R05 134 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 PKP2Q99959 881 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 NMNAT2Q9BZQ4 307 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 RACGAP1Q9H0H5 632 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 SIAEQ9HAT2 523 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 NOX3Q9HBY0 568 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 SLC25A19Q9HC21 320 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 S100A14Q9HCY8 104 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 TMEFF2Q9UIK5 374 aaPredicted RBP11.7□□□□□ -0.54
CDH1-204ENST00000562118 POFUT2Q9Y2G5 429 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 SPG11Q96JI7 2443 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 ROS1P08922 2347 aa11.7□□□□□ -0.54
CDH1-204ENST00000562118 A0A096LPE4 126 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 IGHV1-18A0A0C4DH31 117 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 A0A1W2PPZ6 126 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 G3V2T6 193 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 DCTN6O00399 190 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 SOCS2O14508 198 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 XKRYO14609 159 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 OR8G3PP0DMU2 310 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 GAAP10253 952 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
CDH1-204ENST00000562118 PRKACGP22612 351 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 PTAFRP25105 342 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 CD40P25942 277 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 HOXC12P31275 282 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 GRK5P34947 590 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
CDH1-204ENST00000562118 ZNF84P51523 738 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 ARHGDIAP52565 204 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 MYBPC1Q00872 1141 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 CD47Q08722 323 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 PGGHGQ32M88 737 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 SLC36A3Q495N2 470 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 CDC20BQ86Y33 519 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 ZDHHC13Q8IUH4 622 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 SKA3Q8IX90 412 aa11.69□□□□□ -0.54
CDH1-204ENST00000562118 LILRB1Q8NHL6 650 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms