RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CASRP41180 1078 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 GPR4P46093 362 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 RAB5CP51148 216 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 TSPAN31Q12999 210 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 SYPL1Q16563 259 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 PGGHGQ32M88 737 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 C11orf87Q6NUJ2 197 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 LMAN1LQ9HAT1 526 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 TMEM27Q9HBJ8 222 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 FOXJ3Q9UPW0 622 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
CLK3-206ENST00000562078 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.1□□□□□ -0.47
CLK3-206ENST00000562078 SULT2B1O00204 365 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
CLK3-206ENST00000562078 EML2O95834 649 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 DAOP14920 347 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 GABRG2P18507 467 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 CDK2P24941 298 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PEBP1P30086 187 aaKnown RBP12.09□□□□□ -0.47
CLK3-206ENST00000562078 TRAM1Q15629 374 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR10K2Q6IF99 312 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR2M4Q96R27 311 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR14A2Q96R54 314 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 RHOFQ9HBH0 211 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PRAMEF27A3QJZ7 478 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 CDHR4A6H8M9 788 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 C4orf51C9J302 202 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 HMGN4O00479 90 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 B4GALT2O60909 372 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 CLEC3AO75596 197 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PPP1R3DO95685 299 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 HEXBP07686 556 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 AK4P27144 223 aaPredicted RBP12.09□□□□□ -0.47
CLK3-206ENST00000562078 SLC16A1P53985 500 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 ZNF793Q6ZN11 406 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 TEX19Q8NA77 164 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 STEAP2Q8NFT2 490 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR2L3Q8NG85 312 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 SYNPRQ8TBG9 265 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR5P2Q8WZ92 322 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 GFI1Q99684 422 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 SLC25A18Q9H1K4 315 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 FKRPQ9H9S5 495 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D29Q9UFV1 150 aa12.09□□□□□ -0.47
CLK3-206ENST00000562078 MRPS17Q9Y2R5 130 aaKnown RBP12.09□□□□□ -0.47
CLK3-206ENST00000562078 GON4LQ3T8J9 2241 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 C9JQL5 133 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 CCSO14618 274 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 FRS3O43559 492 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 TMIGD3P0DMS9 266 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 NT5EP21589 574 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 DPP4P27487 766 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 GAMTQ14353 236 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SURF2Q15527 256 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 ZNF750Q32MQ0 723 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 DMKNQ6E0U4 476 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 OR4C11Q6IEV9 310 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SZRD1Q7Z422 152 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 LINC00471Q8N535 108 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 NEURL3Q96EH8 262 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 PRRC1Q96M27 445 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ZNF607Q96SK3 696 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 EXO5Q9H790 373 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 NEUROD4Q9HD90 331 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 APMAPQ9HDC9 416 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 A0A0A6YYD5 115 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ACOT7O00154 380 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 TBX19O60806 448 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 RDH16O75452 317 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 IFNGP01579 166 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 CD8AP01732 235 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ALPPL2P10696 532 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ST6GAL1P15907 406 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 BUD31P41223 144 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 ATP1B3P54709 279 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 PCBP4P57723 403 aaKnown RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 ZP2Q05996 745 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms