RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 DNAJA3Q96EY1 480 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 ARMC7Q9H6L4 198 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 ARL8BQ9NVJ2 186 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 AIG1Q9NVV5 245 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 TMEM45AQ9NWC5 275 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 ZNF221Q9UK13 617 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 PRPF19Q9UMS4 504 aaKnown RBP7.29□□□□□ -1.24
PALB2-202ENST00000561514 RCE1Q9Y256 329 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 RASD1Q9Y272 281 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 CHST2Q9Y4C5 530 aa7.29□□□□□ -1.24
PALB2-202ENST00000561514 LOC102725191A0A1B0GVB3 256 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 EFCAB10A6NFE3 127 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CCDC154A6NI56 674 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CENPXA8MT69 81 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 A8MVM7 634 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ZNF587BE7ETH6 402 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 LILRA1O75019 489 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CPSF4O95639 269 aaKnown RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 LGI1O95970 557 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CRYAAP02489 173 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ALDOCP09972 364 aaKnown RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 OR4A8P0C604 315 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CECR9P0C854 216 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ITGA2P17301 1181 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 HNF1AP20823 631 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 PEX2P28328 305 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CALCRP30988 508 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 S100A3P33764 101 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CHI3L1P36222 383 aaPredicted RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 CDKN2CP42773 168 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 SELENOPP49908 381 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 HGFACQ04756 655 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 GGTLC2Q14390 218 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 OR7A5Q15622 319 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 CHI3L2Q15782 390 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 COX20Q5RI15 118 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ANKRD16Q6P6B7 361 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ZNF836Q6ZNA1 936 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 IGFN1Q86VF2 1251 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 LSRQ86X29 649 aaPredicted RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 ARMC8Q8IUR7 673 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 RFLNBQ8N5W9 214 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 PACRGLQ8N7B6 248 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 MFSD8Q8NHS3 518 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 STK35Q8TDR2 534 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 C3orf49Q96BT1 292 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 AURKBQ96GD4 344 aaPredicted RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 TMEM80Q96HE8 168 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 FOXN4Q96NZ1 517 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 ALKBH3Q96Q83 286 aaPredicted RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 SOX7Q9BT81 388 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 PTDSS2Q9BVG9 487 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 BPESC1Q9GZL8 116 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 B3GAT1Q9P2W7 334 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 GLS2Q9UI32 602 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 RBMX2Q9Y388 322 aaKnown RBP7.28□□□□□ -1.24
PALB2-202ENST00000561514 GPR45Q9Y5Y3 372 aa7.28□□□□□ -1.24
PALB2-202ENST00000561514 TMEM129A0AVI4 362 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SDHDO14521 159 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 TFPTP0C1Z6 253 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 PRG2P13727 222 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 CBR1P16152 277 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 IL7RP16871 459 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 CXCR1P25024 350 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 CD40LGP29965 261 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 RCVRNP35243 200 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 UFM1P61960 85 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 EGR4Q05215 589 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 LGALS3BPQ08380 585 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 IKZF1Q13422 519 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 RIN1Q13671 783 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 IGSF11Q5DX21 431 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 C1orf140Q5VVS0 124 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 PRAMEF8Q5VWM4 474 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 PRAMEF7Q5VXH5 474 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 PGM2L1Q6PCE3 622 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 DEF8Q6ZN54 512 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 MSANTD1Q6ZTZ1 278 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SPATC1Q76KD6 591 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 RHOUQ7L0Q8 258 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 ZNF627Q7L945 461 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SLC46A3Q7Z3Q1 461 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 MYPOPQ86VE0 399 aaPredicted RBP7.27□□□□□ -1.25
PALB2-202ENST00000561514 MEX3DQ86XN8 651 aaKnown RBP7.27□□□□□ -1.25
PALB2-202ENST00000561514 TMEM123Q8N131 208 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 ZNF786Q8N393 782 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 GALNT4Q8N4A0 578 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 GLB1L3Q8NCI6 653 aaPredicted RBP7.27□□□□□ -1.25
PALB2-202ENST00000561514 ADPRHL1Q8NDY3 354 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 TEX47Q8TBZ9 253 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
PALB2-202ENST00000561514 PANX1Q96RD7 426 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SPATA9Q9BWV2 254 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 CHODLQ9H9P2 273 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SEC61A2Q9H9S3 476 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 SLC6A13Q9NSD5 602 aa7.27□□□□□ -1.25
PALB2-202ENST00000561514 RLIMQ9NVW2 624 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms