RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 B3GNT2Q9NY97 397 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 ITPR3Q14573 2671 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 IGHV1-18A0A0C4DH31 117 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 TEX13CA0A0J9YWL9 993 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 SHISA9B4DS77 424 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 H7C1C5 153 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 APEHP13798 732 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 PAX7P23759 505 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 LCN6P62502 163 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 ADAM8P78325 824 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 KRR1Q13601 381 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 C3orf36Q3SXR2 165 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 GPR139Q6DWJ6 353 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 DPY19L2P2Q6ZN68 376 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC22A24Q8N4F4 322 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 FAM169BQ8N8A8 192 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 FNDC8Q8TC99 324 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 NABP1Q96AH0 204 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 DUS3LQ96G46 650 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF75AQ96N20 296 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 DGCR6LQ9BY27 220 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 MOV10Q9HCE1 1003 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 BEX4Q9NWD9 120 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 GRHPRQ9UBQ7 328 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 CDH10Q9Y6N8 788 aa13.5□□□□□ -0.25
RABGGTA-219ENST00000560871 ARHGEF9O43307 516 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 PPP1R3DO95685 299 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 TP53P04637 393 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC6A6P31641 620 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 RPS6KA3P51812 740 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 RIPPLY3P57055 190 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 THEM4Q5T1C6 240 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 RASSF6Q6ZTQ3 369 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 FOXL2NBQ6ZUU3 175 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 MDP1Q86V88 176 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 OR8D4Q8NGM9 314 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 IGFBPL1Q8WX77 278 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 HTRA1Q92743 480 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC38A2Q96QD8 506 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 NIPSNAP1Q9BPW8 284 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 PLA2G12AQ9BZM1 189 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 SEC61A2Q9H9S3 476 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 UBTD1Q9HAC8 227 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 DNAJB9Q9UBS3 223 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 MGAT4BQ9UQ53 548 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 PRR14LQ5THK1 2151 aa13.49□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 PRSS37A4D1T9 235 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 IMPA2O14732 288 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 HS3ST1O14792 307 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ARPC3O15145 178 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 AHCYL1O43865 530 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 TIPRLO75663 272 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 CIB2O75838 187 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 HLA-HP01893 362 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 CELA3BP08861 270 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 CECR9P0C854 216 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 CBR1P16152 277 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF84P51523 738 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF672Q499Z4 452 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 RPL13AP3Q6NVV1 102 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ADCK1Q86TW2 530 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 SKA3Q8IX90 412 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF611Q8N823 705 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 FGFBP3Q8TAT2 258 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 GTPBP3Q969Y2 492 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 ARMC1Q9NVT9 282 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 IL20Q9NYY1 176 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 VSX1Q9NZR4 365 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
RABGGTA-219ENST00000560871 DSCAMO60469 2012 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 BHLHE40O14503 412 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 SOCS2O14508 198 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 XKRYO14609 159 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 GNGT2O14610 69 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 UBL3O95164 117 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 OR8G3PP0DMU2 310 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 ARR3P36575 388 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 CAPZA2P47755 286 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 IDH3GP51553 393 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 CDH11P55287 796 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 CD300LDQ6UXZ3 194 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 KRTAP1-3Q8IUG1 177 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms