RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CA10Q9NS85 328 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 C19orf12Q9NSK7 152 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 TEX10Q9NXF1 929 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 CRLS1Q9UJA2 301 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DHDHQ9UQ10 334 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RPL36Q9Y3U8 105 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 A0A1B0GUH1 482 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 TRDV1A0A1B0GX56 115 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PIRO00625 290 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 MID1O15344 667 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 IFNA2P01563 188 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 UBBP0CG47 229 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 UBCP0CG48 685 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PNMTP11086 282 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RNH1P13489 461 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 KCNE1P15382 129 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 HOXB9P17482 250 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RCC1P18754 421 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 MPGP29372 298 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RAB5CP51148 216 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RPS27AP62979 156 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 UBA52P62987 128 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 BLOC1S1P78537 153 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 MAT1AQ00266 395 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 TPBGQ13641 420 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF239Q16600 458 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 VMACQ2NL98 169 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PYY3Q5JQD4 70 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 C9orf57Q5W0N0 161 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF385CQ66K41 422 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF248Q8NDW4 579 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR4D6Q8NGJ1 314 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR4C15Q8NGM1 316 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR10J5Q8NHC4 309 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DTD1Q8TEA8 209 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DNAJB3Q8WWF6 145 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 GPHA2Q96T91 129 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 IFT27Q9BW83 186 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 GPR87Q9BY21 358 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DPY30Q9C005 99 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RIMS4Q9H426 269 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 CLMPQ9H6B4 373 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 Q9N2J8 555 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 STOX2Q9P2F5 926 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PCTPQ9UKL6 214 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 FBXL3Q9UKT7 428 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 CXorf65A6NEN9 183 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 NPIPB9F8W1W9 429 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 KHDRBS3O75525 346 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CNR2P34972 360 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CEACAM6P40199 344 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ETV5P41161 510 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 GOLGA7BQ2TAP0 167 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF613Q6PF04 617 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ENPP7Q6UWV6 458 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 BAIAP2L2Q6UXY1 529 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC24A5Q71RS6 500 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OAFQ86UD1 273 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FAM131BQ86XD5 332 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 LGI4Q8N135 537 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OR10H4Q8NGA5 316 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 STAG3L4Q8TBR4 150 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CD99L2Q8TCZ2 262 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC35F5Q8WV83 523 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ACOT11Q8WXI4 607 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SNRNP40Q96DI7 357 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 RSPRY1Q96DX4 576 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CDCA3Q99618 268 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TRMT61BQ9BVS5 477 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TLNRD1Q9H1K6 362 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OPN3Q9H1Y3 402 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FN3KRPQ9HA64 309 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CACYBPQ9HB71 228 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 KCTD3Q9Y597 815 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FNDC1Q4ZHG4 1894 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TRAPPC13A5PLN9 417 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ANKRD30BLA7E2S9 258 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MCIDASD6RGH6 385 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 BLOC1S5-TXNDC5H3BN57 136 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF197O14709 1029 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TOX3O15405 576 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF264O43296 627 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 EIF4E2O60573 245 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CRTAPO75718 401 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MBPP02686 304 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CXCL10P02778 98 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 NQO2P16083 231 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 HIST1H1BP16401 226 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 G0S2P27469 103 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 PMELP40967 661 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CRATP43155 626 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 GNG10P50151 68 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 HCCSP53701 268 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SEC61GP60059 68 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 PKIAP61925 76 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 PPIAP62937 165 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SIM1P81133 766 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 DNLZQ5SXM8 178 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OTUD1Q5VV17 481 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MBOAT1Q6ZNC8 495 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms