RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SLC3A1Q07837 685 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 MELKQ14680 651 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC36A2Q495M3 483 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 SPATA46Q5T0L3 261 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 C6orf89Q6UWU4 347 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC16A14Q7RTX9 510 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF584Q8IVC4 421 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 RBM15BQ8NDT2 890 aaKnown RBP8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 CPEB3Q8NE35 698 aaKnown RBP8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 OR4K5Q8NGD3 323 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 NFKBIDQ8NI38 313 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF566Q969W8 418 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 MOGAT1Q96PD6 335 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 MRI1Q9BV20 369 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 SPATA5L1Q9BVQ7 753 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 BCL2L14Q9BZR8 327 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 EGLN1Q9GZT9 426 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 MS4A7Q9GZW8 240 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 C1orf198Q9H425 327 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 FAM53CQ9NYF3 392 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 GLTPQ9NZD2 209 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 GPR45Q9Y5Y3 372 aa8.92□□□□□ -0.98
CDC42BPB-207ENST00000560492 TRPC5OSA6NMA1 111 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 PLPP3O14495 311 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 FOXH1O75593 365 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 SBK2P0C263 348 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 UMPSP11172 480 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 IDO1P14902 403 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF250P15622 560 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 PRKAR1BP31321 381 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF84P51523 738 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 UCP2P55851 309 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 CLRN1P58418 232 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 IL13RA1P78552 427 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 RGNQ15493 299 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 OR1Q1Q15612 314 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 FAM91A1Q658Y4 838 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC35D2Q76EJ3 337 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF627Q7L945 461 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 PXKQ7Z7A4 578 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 RANBP3LQ86VV4 465 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 LRRC18Q8N456 261 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 LRRC17Q8N6Y2 441 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 LSMEM1Q8N8F7 131 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 OR5J2Q8NH18 312 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 POP5Q969H6 163 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC35B4Q969S0 331 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 VPS33AQ96AX1 596 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 TLCD1Q96CP7 247 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 DCLRE1CQ96SD1 692 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 KCNN2Q9H2S1 579 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZMAT3Q9HA38 289 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 CCNB1IP1Q9NPC3 277 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 A4GALTQ9NPC4 353 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 TMEM38BQ9NVV0 291 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 MRPL39Q9NYK5 338 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 NKIRAS2Q9NYR9 191 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 EIF3KQ9UBQ5 218 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF69Q9UC07 566 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 TESQ9UGI8 421 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 OPN4Q9UHM6 478 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 NUP50Q9UKX7 468 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 AUP1Q9Y679 476 aa8.91□□□□□ -0.98
CDC42BPB-207ENST00000560492 IGLV3-9A0A075B6K5 115 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 MCIDASD6RGH6 385 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 CLIC1O00299 241 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 TM9SF1O15321 606 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 DHHO43323 396 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 GPANK1O95872 356 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 HIST1H2ABP04908 130 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 QDPRP09417 244 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZCCHC18P0CG32 403 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 POLR2JP52435 117 aaKnown RBP8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 BST1Q10588 318 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 ZNF718Q3SXZ3 478 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 GCNT6Q5T4J0 391 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 HHATQ5VTY9 493 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 SPATC1Q76KD6 591 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 DOK3Q7L591 496 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 HIST3H2AQ7L7L0 130 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 ANKRD42Q8N9B4 389 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 HIPK4Q8NE63 616 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 OR6S1Q8NH40 331 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 TAF15Q92804 592 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 DVL3Q92997 716 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 HIST1H2ACQ93077 130 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 SLC41A3Q96GZ6 507 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 BCL2L10Q9HD36 194 aa8.9□□□□□ -0.98
CDC42BPB-207ENST00000560492 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 A0A0G2JK05 382 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 KPNA4O00629 521 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 HDAC3O15379 428 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 TPST1O60507 370 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 FZD7O75084 574 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 SNAP29O95721 258 aa8.89□□□□□ -0.99
CDC42BPB-207ENST00000560492 MT-ATP6P00846 226 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms