RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ZNF689Q96CS4 500 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 OTUB2Q96DC9 234 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RSPRY1Q96DX4 576 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PELI1Q96FA3 418 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 FAHD2AQ96GK7 314 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 AMDHD1Q96NU7 426 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MCHR1Q99705 422 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PTPN18Q99952 460 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CMSS1Q9BQ75 279 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 AIF1LQ9BQI0 150 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 NRIP2Q9BQI9 281 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF426Q9BUY5 554 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 BCL2L14Q9BZR8 327 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PCBD2Q9H0N5 130 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 KLHL31Q9H511 634 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ELAC1Q9H777 363 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZCCHC3Q9NUD5 404 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 UFSP2Q9NUQ7 469 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 UQCC1Q9NVA1 299 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC2A8Q9NY64 477 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PPP4R1LQ9P1A2 415 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 LRFN1Q9P244 771 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MIOXQ9UGB7 285 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 OR5V1Q9UGF6 321 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PADI3Q9ULW8 664 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 AK6Q9Y3D8 172 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 KPTNQ9Y664 436 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CASP8AP2Q9UKL3 1982 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 COL4A2P08572 1712 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 A0A0G2JNJ9 132 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TEX13DA0A0J9YY54 714 aaPredicted RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 A0A1W2PR48 441 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 GLTPD2A6NH11 291 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 OR5H14A6NHG9 310 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 DUXAA6NLW8 204 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CPSF4LA6NMK7 179 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 EFCAB7A8K855 629 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 MFNGO00587 321 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 NDUFS4O43181 175 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 SRPX2O60687 465 aaPredicted RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 GJB5O95377 273 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC2A10O95528 541 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CSTBP04080 98 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CD74P04233 296 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 IFI6P09912 130 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 HKR1P10072 659 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ACHEP22303 614 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CDK2P24941 298 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 EDNRAP25101 427 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC6A6P31641 620 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 PYCR1P32322 319 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 AHRP35869 848 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ACVR1BP36896 505 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CASRP41180 1078 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 NPBWR1P48145 328 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ARHGDIBP52566 201 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 EPHB3P54753 998 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 OR12D2P58182 307 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TAS2R19P59542 299 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ACTR1AP61163 376 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ST8SIA6P61647 398 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CRMP1Q14194 572 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TEAD2Q15562 447 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 INPP5JQ15735 1006 aaPredicted RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CEBPEQ15744 281 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ISXQ2M1V0 245 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 C2orf68Q2NKX9 166 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 PCGF3Q3KNV8 242 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 CCSMST1Q4G0I0 132 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM35AQ53FP2 167 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 PIP5KL1Q5T9C9 394 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 C18orf63Q68DL7 685 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 EIF5AL1Q6IS14 154 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM88Q6PEY1 159 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC16A13Q7RTY0 426 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 NAA40Q86UY6 237 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM200AQ86VY9 491 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 NKAIN4Q8IVV8 208 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM151BQ8IW70 566 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 DND1Q8IYX4 353 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 NRSN1Q8IZ57 195 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 COMMD1Q8N668 190 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 TTC9BQ8N6N2 239 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ZDHHC22Q8N966 263 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 PCSK9Q8NBP7 692 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 INO80EQ8NBZ0 244 aaPredicted RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 STEAP2Q8NFT2 490 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 OR52B4Q8NGK2 314 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 GTF3AQ92664 365 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 RSC1A1Q92681 617 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 HIST1H2BAQ96A08 127 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 PIK3IP1Q96FE7 263 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 KIRREL1Q96J84 757 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 ART5Q96L15 291 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 MRGPRX4Q96LA9 322 aa5.4□□□□□ -1.54
SNRPA1-209ENST00000560307 LINC00615Q96LM1 132 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms