RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF525Q8N782 197 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 NUP37Q8NFH4 326 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 OR4F15Q8NGB8 312 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 ZNF519Q8TB69 540 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 NSMAFQ92636 917 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 PYURFQ96I23 114 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 FUZQ9BT04 418 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 REG4Q9BYZ8 158 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 BARX1Q9HBU1 254 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 SAMD4AQ9UPU9 718 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 ADAM18Q9Y3Q7 739 aa10.07□□□□□ -0.8
RABGGTA-216ENST00000560243 CHD3Q12873 2000 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 A0A1W2PRQ8 180 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 TMEM129A0AVI4 362 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 H7C1C5 153 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 GPRIN2O60269 458 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 GMNNO75496 209 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 UBL3O95164 117 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 RAB36O95755 333 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM107AO95990 144 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 IGHMP01871 453 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 HEXAP06865 529 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 IGFBP1P08833 259 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 CCL2P13500 99 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 RHCEP18577 417 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 NR4A1P22736 598 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 LIMS1P48059 325 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ZNF84P51523 738 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 LCN6P62502 163 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ERVK-25P63136 954 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 CD47Q08722 323 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 DAG1Q14118 895 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 DGCR6Q14129 220 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 KRT72Q14CN4 511 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 C10orf128Q5T292 105 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC25A47Q6Q0C1 308 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ZCCHC24Q8N2G6 241 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 LRRC18Q8N456 261 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 PAQR4Q8N4S7 273 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 OR52J3Q8NH60 311 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 NANOS1Q8WY41 292 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 NABP1Q96AH0 204 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 DHRS1Q96LJ7 313 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 SORCS2Q96PQ0 1159 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 GPA33Q99795 319 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ANKRD19PQ9H560 264 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM53CQ9NYF3 392 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 MAGEL2Q9UJ55 1249 aa10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-216ENST00000560243 ANK3Q12955 4377 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 SH3PXD2BA1X283 911 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 B2RBV5 119 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 CENPBD1B2RD01 187 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 B9A039 149 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 PTP4A3O75365 173 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 PDE5AO76074 875 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 SERPINA5P05154 406 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 MMP7P09237 267 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 T-ENOLP0DO92 83 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 NPR2P20594 1047 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 ATP6V1B2P21281 511 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 RPL4P36578 427 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 OMPP47874 163 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC9A3P48764 834 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 EFNA4P52798 201 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 FXYD6P3P58550 94 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 SNRPD2P62316 118 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 EFNB3Q15768 340 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 ZBED5Q49AG3 693 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 GKAP1Q5VSY0 366 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 C16orf89Q6UX73 402 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 CYP2R1Q6VVX0 501 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 RINLQ6ZS11 566 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 RRM2BQ7LG56 351 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC16A14Q7RTX9 510 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 HDDC2Q7Z4H3 204 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 CDK20Q8IZL9 346 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 ARIH2OSQ8N7S6 290 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 IL17RDQ8NFM7 739 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 OR10H5Q8NGA6 315 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 POM121Q96HA1 1249 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 Q96M85 177 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 NSMCE2Q96MF7 247 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 DOK1Q99704 481 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 VRK1Q99986 396 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 PLK3Q9H4B4 646 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 RNF121Q9H920 327 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 IL20RAQ9UHF4 553 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 PMF1-BGLAPU3KQ54 211 aa10.05□□□□□ -0.8
RABGGTA-216ENST00000560243 YLPM1P49750 1951 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms