RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 C11orf65Q8NCR3 313 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 CPEB3Q8NE35 698 aaKnown RBP7.83□□□□□ -1.16
HDDC3-204ENST00000559834 OR4K5Q8NGD3 323 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 FGFBP3Q8TAT2 258 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 ELMOD3Q96FG2 381 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 CCDC28BQ9BUN5 200 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 SLC19A3Q9BZV2 496 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 RABEP2Q9H5N1 569 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 SLCO1B3Q9NPD5 702 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 G6PC2Q9NQR9 355 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 EIF3KQ9UBQ5 218 aaKnown RBP7.83□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF229Q9UJW7 825 aa7.83□□□□□ -1.16
HDDC3-204ENST00000559834 DYSFO75923 2080 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 LOC105371242A0A075B767 164 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 A0A1W2PRG6 482 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 PLSCR5A0PG75 271 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 TRAPPC13A5PLN9 417 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 CENPBD1B2RD01 187 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 BLOC1S5-TXNDC5H3BN57 136 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 UMPSP11172 480 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 CCL2P13500 99 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 GCH1P30793 250 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 LIPAP38571 399 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 IDH3AP50213 366 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF81P51508 661 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 ARFIP2P53365 341 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 HSF2Q03933 536 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 SLC3A1Q07837 685 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 DUSP7Q16829 419 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF718Q3SXZ3 478 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 AGKQ53H12 422 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 RUNDC3AQ59EK9 446 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 ENTPD8Q5MY95 495 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 AVPI1Q5T686 147 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 DCAF12L2Q5VW00 463 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 RBMS3Q6XE24 437 aaKnown RBP7.82□□□□□ -1.16
HDDC3-204ENST00000559834 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
HDDC3-204ENST00000559834 USP51Q70EK9 711 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 C1QL2Q7Z5L3 287 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 WDFY1Q8IWB7 410 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 SLC30A8Q8IWU4 369 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 C1orf174Q8IYL3 243 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 BPIFB2Q8N4F0 458 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 SMYD1Q8NB12 490 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 RBM15BQ8NDT2 890 aaKnown RBP7.82□□□□□ -1.16
HDDC3-204ENST00000559834 OR6T1Q8NGN1 323 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 SLC26A7Q8TE54 656 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 MCHR2Q969V1 340 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 C7orf26Q96N11 449 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 ARHGDIGQ99819 225 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 WFDC6Q9BQY6 131 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 OR51B6Q9H340 312 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 C7orf69Q9H7B7 122 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 SAP30LQ9HAJ7 183 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 NTN4Q9HB63 628 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 DDX28Q9NUL7 540 aaKnown RBP7.82□□□□□ -1.16
HDDC3-204ENST00000559834 STX18Q9P2W9 335 aaKnown RBP7.82□□□□□ -1.16
HDDC3-204ENST00000559834 WIPI2Q9Y4P8 454 aa7.82□□□□□ -1.16
HDDC3-204ENST00000559834 TRBV5-3A0A0A0MS03 114 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CPSF4LA6NMK7 179 aaKnown RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 MCIDASD6RGH6 385 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 M0R3H8 397 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 AVPP01185 164 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 ASAH2BP0C7U1 165 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 PGA4P0DJD7 388 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 PGA3P0DJD8 388 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 NR2C1P13056 603 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CD247P20963 164 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CCNOP22674 350 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 ERVS71-1P61550 626 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 MELKQ14680 651 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 NPTX1Q15818 432 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 HIST3H3Q16695 136 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 TSTQ16762 297 aaKnown RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CYP51A1Q16850 503 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 NANOGNBQ7Z5D8 188 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 PATL1Q86TB9 770 aaKnown RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 ALDH16A1Q8IZ83 802 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 C10orf111Q8N326 155 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 LRRC18Q8N456 261 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 PAQR4Q8N4S7 273 aaPredicted RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 LRRC17Q8N6Y2 441 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 OR1J1Q8NGS3 322 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 ADAMTS16Q8TE57 1224 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 RASSF5Q8WWW0 418 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CCL17Q92583 94 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 TSPAN32Q96QS1 320 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 GAL3ST1Q99999 423 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 TMPRSS13Q9BYE2 586 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 EGLN1Q9GZT9 426 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 SIAEQ9HAT2 523 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CCNB1IP1Q9NPC3 277 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 CYSLTR2Q9NS75 346 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 LEF1Q9UJU2 399 aaPredicted RBP7.81□□□□□ -1.16
HDDC3-204ENST00000559834 SLC7A7Q9UM01 511 aa7.81□□□□□ -1.16
HDDC3-204ENST00000559834 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms