RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GUSBP1Q15486 140 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 HIST3H3Q16695 136 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 EIF2S3LQ2VIR3 472 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 SLC35D3Q5M8T2 416 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 RBM48Q5RL73 367 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 OTPQ5XKR4 325 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 LRFN4Q6PJG9 635 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 SLC25A47Q6Q0C1 308 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 LYPD4Q6UWN0 246 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 AHSA2Q719I0 299 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 SHFQ7M4L6 423 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 NAXEQ8NCW5 288 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 OR51G2Q8NGK0 314 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 OR6K3Q8NGY3 331 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 FNDC8Q8TC99 324 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 NMD3Q96D46 503 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 ZFP3Q96NJ6 502 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TEAD3Q99594 435 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 RHNO1Q9BSD3 238 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 RBM24Q9BX46 236 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 SEC61A2Q9H9S3 476 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 SLC7A10Q9NS82 523 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 WARS2Q9UGM6 360 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 FOXD3Q9UJU5 478 aaPredicted RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.22□□□□□ -0.93
TPM1-221ENST00000559831 PROCRQ9UNN8 238 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TPRKBQ9Y3C4 175 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 RPL36Q9Y3U8 105 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 ESPL1Q14674 2120 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 OR6C65A6NJZ3 312 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 EIF4E1BA6NMX2 242 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 PTGES3LE9PB15 166 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 E9PLN8 166 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 DHHO43323 396 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 SELENOFO60613 162 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 CRHP06850 196 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 STSP08842 583 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 RPSAP08865 295 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 EEF1B2P24534 225 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 CTSSP25774 331 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 CEACAM8P31997 349 aaPredicted RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 CDAP32320 146 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 MTNR1AP48039 350 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ZNF84P51523 738 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 CXCR4P61073 352 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ROR2Q01974 943 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 FAPQ12884 760 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 IGFBP7Q16270 282 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 MEP1BQ16820 701 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 CEACAM16Q2WEN9 425 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 RIPPLY2Q5TAB7 128 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 TMEM211Q6ICI0 200 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 TFAP2EQ6VUC0 442 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 LINGO2Q7L985 606 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 BTLAQ7Z6A9 289 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ZBTB46Q86UZ6 589 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ERI1Q8IV48 349 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 POMGNT2Q8NAT1 580 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ZNF511Q8NB15 262 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 GGHQ92820 318 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 KISS1RQ969F8 398 aaPredicted RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 NR1H4Q96RI1 486 aaPredicted RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 VKORC1Q9BQB6 163 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 LINC00470Q9BZP3 86 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 CRLF2Q9HC73 371 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 GPR35Q9HC97 309 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 PLCXD1Q9NUJ7 323 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 BLOC1S6Q9UL45 172 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 MOKQ9UQ07 419 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 MEMO1Q9Y316 297 aa9.21□□□□□ -0.94
TPM1-221ENST00000559831 SPENQ96T58 3664 aaKnown RBP9.21□□□□□ -0.94
TPM1-221ENST00000559831 PRRC2CQ9Y520 2896 aaKnown RBP9.2□□□□□ -0.94
TPM1-221ENST00000559831 A0A0G2JNJ9 132 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 EFCAB10A6NFE3 127 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 HSPB2A8KAH6 182 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 B8ZZF3 427 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 CCL21O00585 134 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 TNFSF13O75888 250 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 SEC14L2O76054 403 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 MPZL1O95297 269 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 TNFAIP8O95379 198 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 ZNF823P16415 610 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 CRHBPP24387 322 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 LAP3P28838 519 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 GUCA1AP43080 201 aaPredicted RBP9.2□□□□□ -0.94
TPM1-221ENST00000559831 CSNK2BP67870 215 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 GLO1Q04760 184 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 PIGFQ07326 219 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 TMED1Q13445 227 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 HSPB2Q16082 182 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 SGCAQ16586 387 aa9.2□□□□□ -0.94
TPM1-221ENST00000559831 KLHL22Q53GT1 634 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms