RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 JMJD1CQ15652 2540 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 IGHV4-30-2A0A087WSY4 118 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 A0A1W2PRQ8 180 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 FAM171A2A8MVW0 826 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 ARPC2O15144 300 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 LY6HO94772 140 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 RAB36O95755 333 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 RHCEP18577 417 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 NR4A1P22736 598 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 SLC9A3P48764 834 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 CTXN1P60606 82 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 SNTB2Q13425 540 aaKnown RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 DGCR6Q14129 220 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 RAB39AQ14964 217 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 KRT72Q14CN4 511 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 TAF11Q15544 211 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 MSMPQ1L6U9 139 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 KRT80Q6KB66 452 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 TMPRSS11FQ6ZWK6 438 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 OAFQ86UD1 273 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 DEFB107AQ8IZN7 70 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 CLDN22Q8N7P3 220 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 IL17RDQ8NFM7 739 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 ZNF519Q8TB69 540 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 POM121Q96HA1 1249 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 SORCS2Q96PQ0 1159 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 REG4Q9BYZ8 158 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
RPL28-208ENST00000559463 MAGEL2Q9UJ55 1249 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.79□□□□□ -0.369e-9■■■■□ 21.8
RPL28-208ENST00000559463 CUBNO60494 3623 aa12.79□□□□□ -0.36
RPL28-208ENST00000559463 A0A096LNT2 108 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 B9A039 149 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 GPRIN2O60269 458 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 GMNNO75496 209 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 FARS2O95363 451 aaKnown RBP12.78□□□□□ -0.36
RPL28-208ENST00000559463 CDAP32320 146 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 LIMS1P48059 325 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 ZNF84P51523 738 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 CD47Q08722 323 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 DAG1Q14118 895 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 SEC23BQ15437 767 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 ANKDD1AQ495B1 522 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 NRN1LQ496H8 165 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 C16orf89Q6UX73 402 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 OR10H5Q8NGA6 315 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 NABP1Q96AH0 204 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 FAM46AQ96IP4 442 aaKnown RBP12.78□□□□□ -0.36
RPL28-208ENST00000559463 FUZQ9BT04 418 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 ALG12Q9BV10 488 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 SMURF2Q9HAU4 748 aa12.78□□□□□ -0.36
RPL28-208ENST00000559463 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
RPL28-208ENST00000559463 FAM107AO95990 144 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 SERPINA5P05154 406 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 BMP4P12644 408 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 NPR2P20594 1047 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 OMPP47874 163 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 EFNA4P52798 201 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 MXRA7P84157 204 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 FGD3Q5JSP0 725 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 SLC25A47Q6Q0C1 308 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 CLEC2AQ6UVW9 174 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 PAQR4Q8N4S7 273 aaPredicted RBP12.77□□□□□ -0.37
RPL28-208ENST00000559463 NSMAFQ92636 917 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 PYURFQ96I23 114 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 NDE1Q9NXR1 346 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 FBXL3Q9UKT7 428 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 TMEM5Q9Y2B1 443 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
RPL28-208ENST00000559463 FAM32AQ9Y421 112 aaKnown RBP12.77□□□□□ -0.37
RPL28-208ENST00000559463 H7C1C5 153 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 ENTPD5O75356 428 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
RPL28-208ENST00000559463 IGFBP1P08833 259 aaPredicted RBP12.76□□□□□ -0.37
RPL28-208ENST00000559463 MMP7P09237 267 aaPredicted RBP12.76□□□□□ -0.37
RPL28-208ENST00000559463 PPOXP50336 477 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 DSCR9P59020 149 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 LCN6P62502 163 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 ERVK-25P63136 954 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 MRPS34P82930 218 aaKnown RBP12.76□□□□□ -0.37
RPL28-208ENST00000559463 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 ZBED5Q49AG3 693 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 GKAP1Q5VSY0 366 aaPredicted RBP12.76□□□□□ -0.37
RPL28-208ENST00000559463 FAM205BPQ63HN1 556 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
RPL28-208ENST00000559463 RRM2BQ7LG56 351 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms