RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 IGHV3-15A0A0B4J1V0 119 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 A0A1W2PNV4 684 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 PRRG2O14669 202 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 SMAD9O15198 467 aaKnown RBP14.71□□□□□ -0.06
TPM1-219ENST00000559397 EIF1BO60739 113 aaKnown RBP14.71□□□□□ -0.06
TPM1-219ENST00000559397 GLCEO94923 617 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 GABRA1P14867 456 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 CPEP16870 476 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 AHCYP23526 432 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 CD79BP40259 229 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 SH3BGRP55822 239 aaPredicted RBP14.71□□□□□ -0.06
TPM1-219ENST00000559397 ACSM1Q08AH1 577 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 TPBGQ13641 420 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 GALEQ14376 348 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 RTL6Q6ICC9 239 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 NHLRC1Q6VVB1 395 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 CHMP1BQ7LBR1 199 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 KLHL36Q8N4N3 616 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 ROBO4Q8WZ75 1007 aa14.71□□□□□ -0.06
TPM1-219ENST00000559397 ZMYND19Q96E35 227 aaPredicted RBP14.71□□□□□ -0.06
TPM1-219ENST00000559397 RELNP78509 3460 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 AQP7P3A6NL99 342 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 FIGNL2A6NMB9 653 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 AIREO43918 545 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 RAMP1O60894 148 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 RENP00797 406 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 GTF2E2P29084 291 aaKnown RBP14.7□□□□□ -0.06
TPM1-219ENST00000559397 PTGER4P35408 488 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 ACTC1P68032 377 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 ACTA1P68133 377 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 ZNF322Q6U7Q0 402 aaPredicted RBP14.7□□□□□ -0.06
TPM1-219ENST00000559397 FNDC9Q8TBE3 224 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 GATAD2BQ8WXI9 593 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 ZHX1-C8orf76Q96EF9 292 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 TRIB1Q96RU8 372 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 NAA11Q9BSU3 229 aaPredicted RBP14.7□□□□□ -0.06
TPM1-219ENST00000559397 DCUN1D5Q9BTE7 237 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 RPRD1BQ9NQG5 326 aaKnown RBP14.7□□□□□ -0.06
TPM1-219ENST00000559397 VSX1Q9NZR4 365 aaPredicted RBP14.7□□□□□ -0.06
TPM1-219ENST00000559397 ZNF175Q9Y473 711 aa14.7□□□□□ -0.06
TPM1-219ENST00000559397 A0A1W2PRG6 482 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 CD8B2A6NJW9 211 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 SERPINI2O75830 405 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 SYNGR4O95473 234 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 TGM6O95932 706 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 TFP02787 698 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 MRPL3P09001 348 aaKnown RBP14.69□□□□□ -0.06
TPM1-219ENST00000559397 HLA-DOBP13765 273 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 PAX7P23759 505 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 ACVR1BP36896 505 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 MRPL49Q13405 166 aaKnown RBP14.69□□□□□ -0.06
TPM1-219ENST00000559397 C1orf185Q5T7R7 199 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 EEF1A1P5Q5VTE0 462 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 NSUN5P2Q63ZY6 315 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 ABLIM2Q6H8Q1 611 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 RPTNQ6XPR3 784 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 FCRLAQ7L513 359 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 PXKQ7Z7A4 578 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 PHC2Q8IXK0 858 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 OR10H4Q8NGA5 316 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 OR51L1Q8NGJ5 315 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 OR2T4Q8NH00 348 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 CNN2Q99439 309 aaKnown RBP14.69□□□□□ -0.06
TPM1-219ENST00000559397 ALG12Q9BV10 488 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 ALG8Q9BVK2 526 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 OR51E2Q9H255 320 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 TP63Q9H3D4 680 aaPredicted RBP14.69□□□□□ -0.06
TPM1-219ENST00000559397 CALHM2Q9HA72 323 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 NDUFB11Q9NX14 153 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 TINAGQ9UJW2 476 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 MCTS1Q9ULC4 181 aaKnown RBP14.69□□□□□ -0.06
TPM1-219ENST00000559397 FAM215AQ9Y5M1 114 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 ARHGAP21Q5T5U3 1957 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 FAM208BQ5VWN6 2430 aa14.69□□□□□ -0.06
TPM1-219ENST00000559397 POLEQ07864 2286 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 DAPL1A0PJW8 107 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 PRSS37A4D1T9 235 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 SLC22A20A6NK97 555 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 XKRYO14609 159 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ARHGEF9O43307 516 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 CYTIPO60759 359 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 AQP8O94778 261 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 HOXD4P09016 255 aaPredicted RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 OR2T7P0C7T2 308 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ZNF182P17025 639 aaPredicted RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 PYCR1P32322 319 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 VBP1P61758 197 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 NCS1P62166 190 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ZNF85Q03923 595 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 SF3B4Q15427 424 aaKnown RBP eCLIP14.68□□□□□ -0.061e-9■■□□□ 12.9
TPM1-219ENST00000559397 IGFBP7Q16270 282 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 TIMM50Q3ZCQ8 353 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 TMPRSS11AQ6ZMR5 421 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 SEM1Q6ZVN7 128 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 OR6V1Q8N148 313 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 KDM8Q8N371 416 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 GALNT11Q8NCW6 608 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 OR2T27Q8NH04 317 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 RNF128Q8TEB7 428 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 SPRYD4Q8WW59 207 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms