RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 NMNAT1Q9HAN9 279 aaPredicted RBP9.78□□□□□ -0.84
BMP4-204ENST00000558961 POU2F3Q9UKI9 436 aa9.78□□□□□ -0.84
BMP4-204ENST00000558961 LRCH1Q9Y2L9 728 aa9.78□□□□□ -0.84
BMP4-204ENST00000558961 ARFGEF3Q5TH69 2177 aa9.78□□□□□ -0.84
BMP4-204ENST00000558961 ALPK2Q86TB3 2170 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 A0A096LPE4 126 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 A0A1W2PPZ6 126 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 HTR3EA5X5Y0 456 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ZNF503-AS2A6NEH8 195 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 TRIM64A6NGJ6 449 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 TRIM64BA6NI03 449 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 NPIPB13A6NJU9 1138 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 NPIPB4C9JG80 1138 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 H0YAE9 185 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 H7C1Q1 480 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 M0R3G1 203 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 TNFRSF11BO00300 401 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 KPNA4O00629 521 aaPredicted RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 GNGT2O14610 69 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 IGHV4-39P01824 125 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 HEXAP06865 529 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 CECR9P0C854 216 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 PGA4P0DJD7 388 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 PGA3P0DJD8 388 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 IFNGR1P15260 489 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 CBR1P16152 277 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 PRKACGP22612 351 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 APOBEC3AP31941 199 aaPredicted RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 DAPP51397 102 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 NAAAQ02083 359 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 MICAQ29983 383 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SLC36A3Q495N2 470 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SLC35D2Q76EJ3 337 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 NANOGNBQ7Z5D8 188 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 OFCC1Q8IZS5 231 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 FBXL14Q8N1E6 418 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 PFN4Q8NHR9 129 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 TMEM239Q8WW34 195 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 TMEM54Q969K7 222 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 HS6ST2Q96MM7 605 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ZNF75AQ96N20 296 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 MBOAT4Q96T53 435 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SMR3AQ99954 134 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ANKRD60Q9BZ19 345 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ULBP2Q9BZM5 246 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ANKRD19PQ9H560 264 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SMURF2Q9HAU4 748 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 BARX1Q9HBU1 254 aaPredicted RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 B3GAT2Q9NPZ5 323 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SMPD3Q9NY59 655 aaPredicted RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 B3GNT2Q9NY97 397 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 ZNF224Q9NZL3 707 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 MOKQ9UQ07 419 aa9.77□□□□□ -0.85
BMP4-204ENST00000558961 SAMHD1Q9Y3Z3 626 aaKnown RBP9.77□□□□□ -0.85
BMP4-204ENST00000558961 ZNF726A6NNF4 738 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 CENPBD1B2RD01 187 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 C11orf98E9PRG8 122 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SLC16A6O15403 523 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 NDUFS7O75251 213 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SEC14L2O76054 403 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 OR7A10O76100 309 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 CRYAAP02489 173 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 AHCYP23526 432 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 ARR3P36575 388 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 YAP1P46937 504 aaKnown RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 CSNK1A1P48729 337 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 BIDP55957 195 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SMIM11AP58511 58 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 TUBA1BP68363 451 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 TUBA4AP68366 448 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 ST3GAL3Q11203 375 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 PPP1R8Q12972 351 aaKnown RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 CAMK2DQ13557 499 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 HIST3H3Q16695 136 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 CLEC12BQ2HXU8 276 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 C6orf52Q5T4I8 152 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 CARD17Q5XLA6 110 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 TUBA1AQ71U36 451 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 MYPOPQ86VE0 399 aaPredicted RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SLC25A44Q96H78 314 aaPredicted RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 FOXB1Q99853 325 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 CACNG6Q9BXT2 260 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SEC61A2Q9H9S3 476 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 C20orf141Q9NUB4 165 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 PDP1Q9P0J1 537 aaPredicted RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 FAM32AQ9Y421 112 aaKnown RBP9.76□□□□□ -0.85
BMP4-204ENST00000558961 U3KQV3 271 aa9.76□□□□□ -0.85
BMP4-204ENST00000558961 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
BMP4-204ENST00000558961 TRBV4-1A0A0J9YWV2 114 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 SH3PXD2BA1X283 911 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 RNF13O43567 381 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 E2F6O75461 281 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 OR6A2O95222 327 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 GADD45GO95257 159 aa9.75□□□□□ -0.85
BMP4-204ENST00000558961 SNAP29O95721 258 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms