RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 SNX33Q8WV41 574 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 NSMAFQ92636 917 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 MCHR2Q969V1 340 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 TSPAN32Q96QS1 320 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 PRSS27Q9BQR3 290 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 LRMDAQ9H2I8 198 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 MEPEQ9NQ76 525 aaPredicted RBP13.33□□□□□ -0.28
TPM1-211ENST00000558314 INIPQ9NRY2 104 aa13.33□□□□□ -0.28
TPM1-211ENST00000558314 ZNF275Q9NSD4 429 aaPredicted RBP13.33□□□□□ -0.28
TPM1-211ENST00000558314 ZNF346Q9UL40 294 aaKnown RBP13.33□□□□□ -0.28
TPM1-211ENST00000558314 MRASO14807 208 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 RGS9O75916 674 aaPredicted RBP13.32□□□□□ -0.28
TPM1-211ENST00000558314 NCR1O76036 304 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 SLC2A10O95528 541 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 MT-ND1P03886 318 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 DRD4P21917 467 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 CDAP32320 146 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 APLNRP35414 380 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 KLF3P57682 345 aaPredicted RBP13.32□□□□□ -0.28
TPM1-211ENST00000558314 CCL8P80075 99 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 CD47Q08722 323 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 SGCAQ16586 387 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 AVPI1Q5T686 147 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 GLCCI1Q86VQ1 547 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 OR1J2Q8NGS2 313 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 TSPEARQ8WU66 669 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 C11orf40Q8WZ69 217 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 LRRC58Q96CX6 371 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 SH3GL1Q99961 368 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 ARGLU1Q9NWB6 273 aaPredicted RBP13.32□□□□□ -0.28
TPM1-211ENST00000558314 GPR160Q9UJ42 338 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 RIMS3Q9UJD0 308 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
TPM1-211ENST00000558314 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 SLC22A23A1A5C7 686 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 B4DSR2 109 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 FAM157AC9JC47 383 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 WNT9BO14905 357 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 TCF21O43680 179 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 PIP5K1CO60331 668 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 TRMUO75648 421 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 KRT34O76011 436 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 ACADSP16219 412 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 ACHEP22303 614 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 GZMMP51124 257 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 CRYBA2P53672 197 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 MVKQ03426 396 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 FMODQ06828 376 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 LAPTM4AQ15012 233 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 TSTQ16762 297 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 SPATA46Q5T0L3 261 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 SHQ1Q6PI26 577 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 CCDC80Q76M96 950 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 ASB10Q8WXI3 467 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 GTF3AQ92664 365 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 METTL17Q9H7H0 456 aaPredicted RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 HINT3Q9NQE9 182 aaKnown RBP13.31□□□□□ -0.28
TPM1-211ENST00000558314 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 SVEP1Q4LDE5 3571 aa13.31□□□□□ -0.28
TPM1-211ENST00000558314 PTHP01270 115 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 IFNA14P01570 189 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 TROVE2P10155 538 aaKnown RBP eCLIP13.3□□□□□ -0.28
TPM1-211ENST00000558314 ITGA2P17301 1181 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 PCMT1P22061 227 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 THBS2P35442 1172 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 RAD52P43351 418 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 YAP1P46937 504 aaKnown RBP13.3□□□□□ -0.28
TPM1-211ENST00000558314 ARFIP2P53365 341 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 DVL1P1P54792 670 aaPredicted RBP13.3□□□□□ -0.28
TPM1-211ENST00000558314 PABPC1L2AQ5JQF8 200 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 UGT2A3Q6UWM9 527 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 HDDC2Q7Z4H3 204 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 IGFN1Q86VF2 1251 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
TPM1-211ENST00000558314 MICU2Q8IYU8 434 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 OR1J1Q8NGS3 322 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 STON2Q8WXE9 905 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 ZNF416Q9BWM5 594 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 PCDHAC1Q9H158 963 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 C1orf198Q9H425 327 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 DECR2Q9NUI1 292 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
TPM1-211ENST00000558314 C17orf100A8MU93 164 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 OR5F1O95221 314 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms