RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 NFATC4Q14934 902 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 ALG11Q2TAA5 492 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 C9orf152Q5JTZ5 239 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 NXPE4Q6UWF7 544 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 AMZ2Q86W34 360 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 C1QL4Q86Z23 238 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 SFXN5Q8TD22 340 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 ZFPM2Q8WW38 1151 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 TM4SF18Q96CE8 201 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 CD180Q99467 661 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 GFI1Q99684 422 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 MESP1Q9BRJ9 268 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 POTEKPQ9BYX7 375 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 ZNF337Q9Y3M9 751 aa9.91□□□□□ -0.82
USP3-206ENST00000558157 PLXND1Q9Y4D7 1925 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 LRP4O75096 1905 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 TRBV2A0A0J9YWF9 115 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 A0A1W2PPK0 400 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 K7ESF4 209 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 TERTO14746 1132 aaKnown RBP9.9□□□□□ -0.82
USP3-206ENST00000558157 EMC8O43402 210 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 ZGLP1P0C6A0 271 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 OR2T7P0C7T2 308 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 RNF224P0DH78 156 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 CXCL12P48061 93 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 TBPL1P62380 186 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 FOXK2Q01167 660 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 KCNAB1Q14722 419 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 SSX2Q16385 188 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 RPE65Q16518 533 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 OR10K2Q6IF99 312 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 REC114Q7Z4M0 266 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 MMP21Q8N119 569 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 DEFB119Q8N690 84 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 ARL6IP6Q8N6S5 226 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 OR2T27Q8NH04 317 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 RPS4Y2Q8TD47 263 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 WNT2BQ93097 391 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 MOAP1Q96BY2 351 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 PELI1Q96FA3 418 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 SLC41A3Q96GZ6 507 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 C14orf144Q96I85 54 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 HS6ST2Q96MM7 605 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 ZNF426Q9BUY5 554 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 SLITRK2Q9H156 845 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
USP3-206ENST00000558157 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 POFUT1Q9H488 388 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 MED20Q9H944 212 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 NOX4Q9NPH5 578 aa9.9□□□□□ -0.82
USP3-206ENST00000558157 PRSS38A1L453 326 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 ZC3H12DA2A288 527 aaKnown RBP9.9□□□□□ -0.83
USP3-206ENST00000558157 RIIAD1A6NNX1 92 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 PIP5K1CO60331 668 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 ITGA3P26006 1051 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.83
USP3-206ENST00000558157 DMWDQ09019 674 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 AIMP2Q13155 320 aaKnown RBP9.9□□□□□ -0.83
USP3-206ENST00000558157 ZNF239Q16600 458 aaKnown RBP9.9□□□□□ -0.83
USP3-206ENST00000558157 SLC29A4Q7RTT9 530 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 GDF7Q7Z4P5 450 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 OR51S1Q8NGJ8 323 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 NUDCD2Q8WVJ2 157 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 OR1E3Q8WZA6 343 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 WDR92Q96MX6 357 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 LRFN5Q96NI6 719 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 RHOFQ9HBH0 211 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 LPAR3Q9UBY5 353 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.9□□□□□ -0.83
USP3-206ENST00000558157 TIMM10BQ9Y5J6 103 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 KPTNQ9Y664 436 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 SLCO1B1Q9Y6L6 691 aa9.9□□□□□ -0.83
USP3-206ENST00000558157 TEX13DA0A0J9YY54 714 aaPredicted RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 METTL21EPA6NDL7 271 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 ZNF705EA8MWA4 302 aaPredicted RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 CDC42EP2O14613 210 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 MAGEB4O15481 346 aaPredicted RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 CD14P08571 375 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 PRKXP51817 358 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 ACTBP60709 375 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 ACTG1P63261 375 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 TAF13Q15543 124 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 CCSMST1Q4G0I0 132 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 LIPNQ5VXI9 398 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 AWAT2Q6E213 333 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 DND1Q8IYX4 353 aaKnown RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 OR13H1Q8NG92 308 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 ZNF480Q8WV37 535 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 PPP1R1CQ8WVI7 109 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 CLCC1Q96S66 551 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 TIMM29Q9BSF4 260 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 OR52A5Q9H2C5 316 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 MRPS30Q9NP92 439 aaKnown RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 ZCCHC3Q9NUD5 404 aaKnown RBP9.89□□□□□ -0.83
USP3-206ENST00000558157 KCNK6Q9Y257 313 aa9.89□□□□□ -0.83
USP3-206ENST00000558157 WIF1Q9Y5W5 379 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms