RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 H6PDO95479 791 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 IFNA6P05013 189 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 SNRPAP09012 282 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 UBTFL1P0CB47 393 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 ANXA3P12429 323 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 IGLL1P15814 213 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CMA1P23946 247 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ATP5A1P25705 553 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 DPP4P27487 766 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 EPHX2P34913 555 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACADVLP49748 655 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 EMP2P54851 167 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 LIM2P55344 173 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 OR2B6P58173 313 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTBP60709 375 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTA2P62736 377 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTG1P63261 375 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTG2P63267 376 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTC1P68032 377 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ACTA1P68133 377 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 MRPS11P82912 194 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 CDC20Q12834 499 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 NAB1Q13506 487 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 UAP1Q16222 522 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 SYPL1Q16563 259 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 MICBQ29980 383 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C18orf21Q32NC0 220 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 COQ5Q5HYK3 327 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 MARCH8Q5T0T0 291 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CYB5R2Q6BCY4 276 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 NIPAL3Q6P499 406 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 LRRC8BQ6P9F7 803 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 UQCC3Q6UW78 93 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 STAC2Q6ZMT1 411 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 Q6ZPB1 254 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 SLC35D2Q76EJ3 337 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 SNX20Q7Z614 316 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 LHFPL4Q7Z7J7 247 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 TMEM252Q8N6L7 170 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 OR2L3Q8NG85 312 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 DTD1Q8TEA8 209 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 HTR3CQ8WXA8 447 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ST8SIA1Q92185 356 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ELMO1Q92556 727 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 NRGNQ92686 78 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 GTF2H4Q92759 462 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 IL22RA2Q969J5 263 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 UPRTQ96BW1 309 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 TM4SF19Q96DZ7 209 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CEP19Q96LK0 163 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 TMEM175Q9BSA9 504 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 MED10Q9BTT4 135 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C20orf24Q9BUV8 137 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 TM6SF2Q9BZW4 377 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 FAM107BQ9H098 131 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 COMMD4Q9H0A8 199 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ELOVL6Q9H5J4 265 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 DHX33Q9H6R0 707 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 TRIM45Q9H8W5 580 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 FOLH1BQ9HBA9 442 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C12orf4Q9NQ89 552 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C20orf96Q9NUD7 363 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 TAS2R7Q9NYW3 318 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ADA2Q9NZK5 511 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 P2RX2Q9UBL9 471 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CLEC2DQ9UHP7 191 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C3orf18Q9UK00 162 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 RAB26Q9ULW5 256 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 UBQLN1Q9UMX0 589 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 FLVCR2Q9UPI3 526 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 B9D1Q9UPM9 204 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 PLLPQ9Y342 182 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CACNG2Q9Y698 323 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CDH10Q9Y6N8 788 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 COL4A4P53420 1690 aaPredicted RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 MEGF6O75095 1541 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 METP08581 1390 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CDC42BPBQ9Y5S2 1711 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 NACADO15069 1562 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 IGHV1OR15-1A0A075B7D0 117 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 IGKV6-21A0A0C4DH24 114 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 FUOMA2VDF0 154 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 GOLGA6L10A6NI86 522 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ARGFXA6NJG6 315 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 E7ESA3 106 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 AIM2O14862 343 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 DENRO43583 198 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 GATCO43716 136 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 ADAP1O75689 374 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 VAMP5O95183 116 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 KLF8O95600 359 aaPredicted RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 TSPAN12O95859 305 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CST1P01037 141 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 APOEP02649 317 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 HMGN1P05114 100 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CRYGBP07316 175 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 SERPINA6P08185 405 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 DBTP11182 482 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 POLR2EP19388 210 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms