RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 OR51B6Q9H340 312 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF665Q9H7R5 613 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SLCO1C1Q9NYB5 712 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 PCDHB10Q9UN67 800 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 TRIM33Q9UPN9 1127 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 TMEM89A2RUT3 159 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 TRAPPC13A5PLN9 417 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 PLPP2O43688 288 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 DEAF1O75398 565 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 ARFIP2P53365 341 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 HILS1P60008 231 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 MVKQ03426 396 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 CYP51A1Q16850 503 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 TBC1D28Q2M2D7 210 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 AVPI1Q5T686 147 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 DPP10Q8N608 796 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 OR1J2Q8NGS2 313 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 VANGL1Q8TAA9 524 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 LRRC8CQ8TDW0 803 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF347Q96SE7 839 aa13.59□□□□□ -0.23
SCFD1-224ENST00000557713 MEPEQ9NQ76 525 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 LEF1Q9UJU2 399 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-224ENST00000557713 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 BLOC1S5-TXNDC5H3BN57 136 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 MGRN1O60291 552 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 RGS9O75916 674 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 IGHV3-13P01766 116 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 IGHG1P01857 330 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF133P52736 654 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 CLRN1P58418 232 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 MTPNP58546 118 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 TEKQ02763 1124 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 PLP2Q04941 152 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 PATL1Q86TB9 770 aaKnown RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 GTF3AQ92664 365 aaKnown RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 TAMM41Q96BW9 452 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 CGREF1Q99674 301 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 TMPRSS13Q9BYE2 586 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 LRMDAQ9H2I8 198 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 RABEP2Q9H5N1 569 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 KAT8Q9H7Z6 458 aaKnown RBP13.58□□□□□ -0.24
SCFD1-224ENST00000557713 NDUFAF1Q9Y375 327 aa13.58□□□□□ -0.24
SCFD1-224ENST00000557713 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 MPZL1O95297 269 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 F13BP05160 661 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 UMPSP11172 480 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 EPHA1P21709 976 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF84P51523 738 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 CRYBA2P53672 197 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 UGT2B15P54855 530 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 ACTG1P63261 375 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
SCFD1-224ENST00000557713 MOGQ16653 247 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 C10orf128Q5T292 105 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 AGBL2Q5U5Z8 902 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 USP51Q70EK9 711 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 NANOGNBQ7Z5D8 188 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 SLC30A8Q8IWU4 369 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 LRRC18Q8N456 261 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 SYT14Q8NB59 555 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 RBM15BQ8NDT2 890 aaKnown RBP13.57□□□□□ -0.24
SCFD1-224ENST00000557713 OR1J1Q8NGS3 322 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 ASB10Q8WXI3 467 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 CACNG2Q9Y698 323 aa13.57□□□□□ -0.24
SCFD1-224ENST00000557713 A0A1W2PRG6 482 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 SPRY1O43609 319 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-224ENST00000557713 TRMUO75648 421 aaKnown RBP13.56□□□□□ -0.24
SCFD1-224ENST00000557713 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 ACADSP16219 412 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 FUT1P19526 365 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 GZMMP51124 257 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 TSTQ16762 297 aaKnown RBP13.56□□□□□ -0.24
SCFD1-224ENST00000557713 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 GCDHQ92947 438 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-224ENST00000557713 RAB39BQ96DA2 213 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 DECR2Q9NUI1 292 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 UGT2A1Q9Y4X1 527 aa13.56□□□□□ -0.24
SCFD1-224ENST00000557713 A0A0G2JMP0 313 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms