RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 THEM4Q5T1C6 240 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 PGM2L1Q6PCE3 622 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 IGFN1Q86VF2 1251 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 AQP12AQ8IXF9 295 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 SLC22A24Q8N4F4 322 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 ZNF519Q8TB69 540 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 GNPDA2Q8TDQ7 276 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
SLIRP-211ENST00000557623 NEUROG1Q92886 237 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 RSRC1Q96IZ7 334 aaKnown RBP10.88□□□□□ -0.67
SLIRP-211ENST00000557623 TSPAN32Q96QS1 320 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 RBP7Q96R05 134 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 DHRS9Q9BPW9 319 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 TMEM38BQ9NVV0 291 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 FBXL3Q9UKT7 428 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 MOKQ9UQ07 419 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 LAMP3Q9UQV4 416 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 ATP23Q9Y6H3 246 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 LRBAP50851 2863 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 E7EQL1 145 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 XKRYO14609 159 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 AHCYL1O43865 530 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 RAB36O95755 333 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 CECR9P0C854 216 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 DANCRP0C864 163 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 PAX1P15863 534 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 NPR2P20594 1047 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 FPR3P25089 353 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-211ENST00000557623 RPS6KA3P51812 740 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ERVK-25P63136 954 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 MYBPC1Q00872 1141 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 NAAAQ02083 359 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 AGAP6Q5VW22 663 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 SHEQ5VZ18 495 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 GPR139Q6DWJ6 353 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 C1orf94Q6P1W5 598 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 DPY19L2P2Q6ZN68 376 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ZER1Q7Z7L7 766 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 MDP1Q86V88 176 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 FBXL14Q8N1E6 418 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ARIH2OSQ8N7S6 290 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 GPX7Q96SL4 187 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-211ENST00000557623 GRIP2Q9C0E4 1043 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 KCNN2Q9H2S1 579 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 LYVE1Q9Y5Y7 322 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 POLQO75417 2590 aa10.87□□□□□ -0.67
SLIRP-211ENST00000557623 PRRC2AP48634 2157 aaKnown RBP10.87□□□□□ -0.67
SLIRP-211ENST00000557623 TACC2O95359 2948 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 ATP6V1G2-DDX39BF2Z307 99 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 GSC2O15499 205 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 HLA-HP01893 362 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 SDHAP31040 664 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 TTKP33981 857 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 FABP6P51161 128 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 RAB1AP62820 205 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 NKX6-1P78426 367 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 MRPS34P82930 218 aaKnown RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 PIGFQ07326 219 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 NPRL3Q12980 569 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 FLOT2Q14254 428 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 GK3PQ14409 553 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 PGGHGQ32M88 737 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 OR2T5Q6IEZ7 315 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 TMEM53Q6P2H8 277 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 SKA3Q8IX90 412 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 OR4F15Q8NGB8 312 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 OR2T29Q8NH02 315 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 FANK1Q8TC84 345 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 GTPBP3Q969Y2 492 aaKnown RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 NMD3Q96D46 503 aaKnown RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 TRMT61AQ96FX7 289 aaKnown RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 GSX2Q9BZM3 304 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-211ENST00000557623 YY1AP1Q9H869 796 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 REEP1Q9H902 201 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 NRIP3Q9NQ35 241 aa10.86□□□□□ -0.67
SLIRP-211ENST00000557623 ROS1P08922 2347 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 MYO9AB2RTY4 2548 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 DHRS12A0PJE2 317 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 ZNF503-AS2A6NEH8 195 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 VSTM5A8MXK1 200 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 CCNB2O95067 398 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 SLC2A10O95528 541 aa10.85□□□□□ -0.67
SLIRP-211ENST00000557623 SOD3P08294 240 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms