RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 RPL5P46777 297 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 AP3S2P59780 193 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CDC42P60953 191 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RPL27P61353 136 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 NAA20P61599 178 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RANP62826 216 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAP62937 165 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ELAVL3Q14576 367 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TRAM2Q15035 370 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PDK3Q15120 406 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CDK10Q15131 360 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNHIT3Q15649 155 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SLC1A5Q15758 541 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TOMM34Q15785 309 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CAMK4Q16566 473 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 EXOC3L4Q17RC7 722 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 KNOP1Q1ED39 458 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SLC36A3Q495N2 470 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PABPC1L2AQ5JQF8 200 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PDZK1Q5T2W1 519 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CARD17Q5XLA6 110 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 EMBQ6PCB8 327 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 DOK6Q6PKX4 331 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ARSKQ6UWY0 536 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 BTNL3Q6UXE8 466 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 STAC2Q6ZMT1 411 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PLEKHG7Q6ZR37 379 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CYP4Z1Q86W10 505 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PUSL1Q8N0Z8 303 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF786Q8N393 782 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PARP8Q8N3A8 854 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GTPBP8Q8N3Z3 284 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CERS5Q8N5B7 392 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 EIF4E3Q8N5X7 224 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 FAM83FQ8NEG4 500 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR4C5Q8NGB2 326 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR4M1Q8NGD0 313 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR9A2Q8NGT5 310 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GPR148Q8TDV2 347 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ELMO1Q92556 727 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RNF145Q96MT1 663 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SERPINB11Q96P15 392 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TNFRSF13CQ96RJ3 184 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF2Q9BSG1 426 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RSG1Q9BU20 258 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MAGT1Q9H0U3 335 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GOLPH3Q9H4A6 298 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 NXF3Q9H4D5 531 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GEMIN7Q9H840 131 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GNB4Q9HAV0 340 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 LYRM4Q9HD34 91 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 STMN3Q9NZ72 180 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TBC1D24Q9ULP9 559 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MGAT4AQ9UM21 535 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MOKQ9UQ07 419 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 KLHDC2Q9Y2U9 406 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HSPE1-MOB4S4R3N1 261 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MYO5BQ9ULV0 1848 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 FMN1Q68DA7 1419 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TET3O43151 1660 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ABCA8O94911 1581 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SIPA1L1O43166 1804 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 FAM240BA0A1B0GVZ2 78 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1W2PNV4 684 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM89A2RUT3 159 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 USP27XA6NNY8 438 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SUPT3HB4E1H0 165 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 K7EQM0 130 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 M0QZK8 103 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TCAPO15273 167 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CST8O60676 142 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZG16O60844 167 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 UGT2B11O75310 529 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR2F2O95006 317 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TSPAN12O95859 305 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HPRP00739 348 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CALCBP10092 127 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF30P17039 623 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF7P17097 686 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 F8A1P23610 371 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HTR2AP28223 471 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 IL12BP29460 328 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PPP2R1BP30154 601 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HNRNPH3P31942 346 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 FOXN2P32314 431 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CA5AP35218 305 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 FDFT1P37268 417 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HSPA9P38646 679 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RGRP47804 291 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RPL34P49207 117 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MRPL19P49406 292 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GEMP55040 296 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RAP1BP61224 184 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RPS15P62841 145 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 HERVK_113P63132 956 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ERVK-8P63133 956 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RBBP4Q09028 425 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZIC1Q15915 447 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF699Q32M78 642 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms