RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MATN1P21941 496 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 COL8A2P25067 703 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TACR3P29371 465 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 RANBP1P43487 201 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 GPR6P46095 362 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 SELENOPP49908 381 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 P2RY4P51582 365 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 POLR2HP52434 150 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 LMO4P61968 165 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 KCNJ10P78508 379 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 HTD2P86397 168 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 POU3F1Q03052 451 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 FUT5Q11128 374 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 NPRL3Q12980 569 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 OR7A5Q15622 319 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ARHGAP11BQ3KRB8 267 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 UGT3A2Q3SY77 523 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 FAM153CQ494X1 144 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 MIDNQ504T8 468 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 KRBOX4Q5JUW0 171 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ELFN2Q5R3F8 820 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TYW3Q6IPR3 259 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 FAHD2BQ6P2I3 314 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 FRRS1Q6ZNA5 592 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 C6orf120Q7Z4R8 191 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 GPAT4Q86UL3 456 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 PQLC1Q8N2U9 271 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ARFGAP2Q8N6H7 521 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM99Q8N816 258 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 MAGEE2Q8TD90 523 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TWIST2Q8WVJ9 160 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 IFT81Q8WYA0 676 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 CNOT9Q92600 299 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 COQ8BQ96D53 544 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 FAHD2AQ96GK7 314 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 SLC35G5Q96KT7 338 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 CMTM3Q96MX0 182 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF317Q96PQ6 595 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 NR1H4Q96RI1 486 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 JMJD8Q96S16 334 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ABHD1Q96SE0 405 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 SLC6A7Q99884 636 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF747Q9BV97 191 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 SF3B5Q9BWJ5 86 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 MRPL37Q9BZE1 423 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 VCX3BQ9H321 246 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 OR51I1Q9H343 314 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 NOX3Q9HBY0 568 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 EXOSC3Q9NQT5 275 aaKnown RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 PCDHB16Q9NRJ7 776 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TAS2R3Q9NYW6 316 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 PSMC3IPQ9P2W1 217 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 EXTL2Q9UBQ6 330 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 DCDC2Q9UHG0 476 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 WDR45Q9Y484 360 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 RNF103-CHMP3A0A140T963 221 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 LOC102723971A0A1B0GUV8 181 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 A4D1N5 150 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 BOLA2-SMG1P6H3BVE0 249 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 M0R233 179 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CASQ2O14958 399 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SYNGR3O43761 229 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 HNRNPCL1O60812 293 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SCN2BO60939 215 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 TSC22D2O75157 780 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 GLRA3O75311 464 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 LYPLA1O75608 230 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 NCR1O76036 304 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 HPXP02790 462 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 AMY1AP04745 511 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CD1AP06126 327 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 GPIP06744 558 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CHRNGP07510 517 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 GUSBP08236 651 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 OR12D1P0DN82 309 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CPA3P15088 417 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CBR1P16152 277 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ADRA2CP18825 462 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 PRPS1L1P21108 318 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CPT2P23786 658 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ALDH3B1P43353 468 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 UCP3P55916 312 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CTXN1P60606 82 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 UBA52P62987 128 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SCN1BQ07699 218 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SNTB2Q13425 540 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CEACAM7Q14002 265 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 IRF3Q14653 427 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CCDC153Q494R4 210 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 NRN1LQ496H8 165 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SLC9B1Q4ZJI4 515 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 XKR7Q5GH72 579 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ATAD3BQ5T9A4 648 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 IL23RQ5VWK5 629 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 DGAT2L7PQ6IED9 249 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 WDR93Q6P2C0 686 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 NIPAL3Q6P499 406 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 TNFAIP8L2Q6P589 184 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CREB3L2Q70SY1 520 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 C1QL2Q7Z5L3 287 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms