RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OR2Y1Q8NGV0 311 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR2T27Q8NH04 317 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MCFD2Q8NI22 146 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NDNFQ8TB73 568 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 M1APQ8TC57 530 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SLC22A8Q8TCC7 542 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GPR119Q8TDV5 335 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ST8SIA1Q92185 356 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 UFD1Q92890 307 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 C1GALT1C1Q96EU7 318 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SH3YL1Q96HL8 342 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 OPALINQ96PE5 141 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TAAR9Q96RI9 348 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GPX7Q96SL4 187 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 SECISBP2Q96T21 854 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 CHCHD6Q9BRQ6 235 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MED18Q9BUE0 208 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TAPBPLQ9BX59 468 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ULBP3Q9BZM4 244 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 WDR12Q9GZL7 423 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF700Q9H0M5 742 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR51E2Q9H255 320 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR51V1Q9H2C8 321 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 FKRPQ9H9S5 495 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 HINT3Q9NQE9 182 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 SERINC1Q9NRX5 453 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NDUFB11Q9NX14 153 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CRNNQ9UBG3 495 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 GRHPRQ9UBQ7 328 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CHRNA9Q9UGM1 479 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 STUB1Q9UNE7 303 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MOKQ9UQ07 419 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 B3GNT3Q9Y2A9 372 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GSTK1Q9Y2Q3 226 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TMED7Q9Y3B3 224 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 PEX16Q9Y5Y5 336 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 HELZ2Q9BYK8 2649 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 DSPP15924 2871 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
SRP54-212ENST00000556992 A0A075B6Q4 140 aa4□□□□□ -1.77
SRP54-212ENST00000556992 IGLV3-32A0A0A0MS00 114 aa4□□□□□ -1.77
SRP54-212ENST00000556992 PNMA8CA0A1B0GUJ8 204 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TRDV1A0A1B0GX56 115 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ANKUB1A6NFN9 424 aa4□□□□□ -1.77
SRP54-212ENST00000556992 FAM183AA6NL82 134 aa4□□□□□ -1.77
SRP54-212ENST00000556992 C12orf71A8MTZ7 269 aa4□□□□□ -1.77
SRP54-212ENST00000556992 CENPBD1B2RD01 187 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TAF4O00268 1085 aa4□□□□□ -1.77
SRP54-212ENST00000556992 WWP2O00308 870 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SOCS6O14544 535 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF208O43345 1280 aa4□□□□□ -1.77
SRP54-212ENST00000556992 CSO75390 466 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 GPX5O75715 221 aa4□□□□□ -1.77
SRP54-212ENST00000556992 KLF7O75840 302 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 OR2J2O76002 312 aa4□□□□□ -1.77
SRP54-212ENST00000556992 IL1AP01583 271 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ADRA2AP08913 450 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TACSTD2P09758 323 aa4□□□□□ -1.77
SRP54-212ENST00000556992 RAB40ALP0C0E4 278 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SBK2P0C263 348 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ASAH2BP0C7U1 165 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF806P0C7X5 589 aa4□□□□□ -1.77
SRP54-212ENST00000556992 NHLRC4P0CG21 123 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 CD59P13987 128 aa4□□□□□ -1.77
SRP54-212ENST00000556992 F8A1P23610 371 aa4□□□□□ -1.77
SRP54-212ENST00000556992 FGF9P31371 208 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 GABRA5P31644 462 aa4□□□□□ -1.77
SRP54-212ENST00000556992 AQP2P41181 271 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SOX3P41225 446 aa4□□□□□ -1.77
SRP54-212ENST00000556992 EIF1P41567 113 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 CRYBB2P43320 205 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ENTPD1P49961 510 aa4□□□□□ -1.77
SRP54-212ENST00000556992 BLVRAP53004 296 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SLC25A1P53007 311 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SLC16A1P53985 500 aa4□□□□□ -1.77
SRP54-212ENST00000556992 DLX5P56178 289 aa4□□□□□ -1.77
SRP54-212ENST00000556992 FBXW4P57775 412 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TAS2R43P59537 309 aa4□□□□□ -1.77
SRP54-212ENST00000556992 RPS4XP62701 263 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 ERVK-25P63136 954 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF45Q02386 682 aa4□□□□□ -1.77
SRP54-212ENST00000556992 HSF2Q03933 536 aa4□□□□□ -1.77
SRP54-212ENST00000556992 RUNX1T1Q06455 604 aa4□□□□□ -1.77
SRP54-212ENST00000556992 MALLQ13021 153 aa4□□□□□ -1.77
SRP54-212ENST00000556992 EIF3IQ13347 325 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 CRMP1Q14194 572 aa4□□□□□ -1.77
SRP54-212ENST00000556992 QPRTQ15274 297 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TRAM1Q15629 374 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SSX1Q16384 188 aa4□□□□□ -1.77
SRP54-212ENST00000556992 COL28A1Q2UY09 1125 aa4□□□□□ -1.77
SRP54-212ENST00000556992 BTBD16Q32M84 506 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ALG10Q5BKT4 473 aa4□□□□□ -1.77
SRP54-212ENST00000556992 C1orf140Q5VVS0 124 aa4□□□□□ -1.77
SRP54-212ENST00000556992 LIPKQ5VXJ0 399 aa4□□□□□ -1.77
SRP54-212ENST00000556992 LCN10Q6JVE6 187 aa4□□□□□ -1.77
SRP54-212ENST00000556992 FAM199XQ6PEV8 388 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF322Q6U7Q0 402 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF517Q6ZMY9 492 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 JAZF1Q86VZ6 243 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms