RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TRBV5-7A0A0A0MS05 114 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 PMS2P1A4D2B8 440 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 LIPT2A6NK58 231 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 AIPO00170 330 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 OR2T1O43869 369 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 TRIM3O75382 744 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF254O75437 659 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 ITGA10O75578 1167 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 CCKBRP32239 447 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 APOBEC1P41238 236 aaKnown RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 DLX5P56178 289 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 ZFP36L1Q07352 338 aaKnown RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 EIF2B1Q14232 305 aaKnown RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 SLC17A1Q14916 467 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 UBE2NLQ5JXB2 153 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 LINC00346Q8IVM7 164 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 SERPINA12Q8IW75 414 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF676Q8N7Q3 588 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 DUSP18Q8NEJ0 188 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 OR2M3Q8NG83 312 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 TTC9Q92623 222 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 NXPE2Q96DL1 559 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 SPACA9Q96E40 222 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 FYTTD1Q96QD9 318 aaKnown RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 SNX18Q96RF0 628 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 EMC6Q9BV81 110 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 DEFB126Q9BYW3 111 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 NEK6Q9HC98 313 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 RANGRFQ9HD47 186 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 CHST11Q9NPF2 352 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 C19orf25Q9UFG5 118 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 OR5V1Q9UGF6 321 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 TEKT2Q9UIF3 430 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 GTF2A1LQ9UNN4 478 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 PTRH2Q9Y3E5 179 aaKnown RBP9.08□□□□□ -0.96
TMEM260-211ENST00000556648 N6AMT1Q9Y5N5 214 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 B3GALT1Q9Y5Z6 326 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 EML6Q6ZMW3 1958 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 TECTAO75443 2155 aa9.08□□□□□ -0.96
TMEM260-211ENST00000556648 KIF26BQ2KJY2 2108 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 A0A1W2PNR3 127 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TRABD2BA6NFA1 517 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF814B7Z6K7 855 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 NPIPA5E9PKD4 350 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 PDCD5O14737 125 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CER1O95813 267 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 MAS1P04201 325 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 NAGAP17050 411 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF41P51814 821 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TLE3Q04726 772 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 SIGLEC14Q08ET2 396 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 MYBPHQ13203 477 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 IL11RAQ14626 422 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 NTRK2Q16620 822 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 SLC18B1Q6NT16 456 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 H1FNTQ75WM6 255 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 SIAH3Q8IW03 269 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM105Q8N8V8 129 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 OR6S1Q8NH40 331 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 SLC22A8Q8TCC7 542 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ELP5Q8TE02 316 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 DDIT4LQ96D03 193 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZC3H10Q96K80 434 aaKnown RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 C5orf34Q96MH7 638 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 DCBLD2Q96PD2 775 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 MNTQ99583 582 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ABHD6Q9BV23 337 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ABCG5Q9H222 651 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 KCNK15Q9H427 330 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 LIN7BQ9HAP6 207 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 B3GAT1Q9P2W7 334 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 GPN3Q9UHW5 284 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 FBXL3Q9UKT7 428 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 NPIPA1Q9UND3 350 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CACNG2Q9Y698 323 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM14AQ9Y6G1 99 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 V9GY05 133 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 VPS13AQ96RL7 3174 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 LOC102723996A0A087X1L8 192 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 IGLV3-32A0A0A0MS00 114 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 IGHV1-45A0A0A0MS14 117 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 LOC101059948A0A1B0GTJ6 334 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM221A6NGB7 291 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ETV2O00321 342 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 PHYHO14832 338 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF208O43345 1280 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 UBL3O95164 117 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 TMIGD3P0DMS9 266 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-211ENST00000556648 COX6A1P12074 109 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 PTHLHP12272 177 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 PTGS2P35354 604 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CLDN6P56747 220 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 HSF1Q00613 529 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 CD83Q01151 205 aa9.07□□□□□ -0.96
TMEM260-211ENST00000556648 ZP4Q12836 540 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms