RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 FOXH1O75593 365 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SERPINI2O75830 405 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 MT-ATP6P00846 226 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 IGHV3-13P01766 116 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 VIMP08670 466 aaKnown RBP10.09□□□□□ -0.79
ACTN1-221ENST00000556571 BMP2P12643 396 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 CCL2P13500 99 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 ATP4BP51164 291 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 BIDP55957 195 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 ERVS71-1P61550 626 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 NCALDP61601 193 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 IL13RA1P78552 427 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 LCN2P80188 198 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 PLP2Q04941 152 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SLC3A1Q07837 685 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 FADDQ13158 208 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 TSTQ16762 297 aaKnown RBP10.09□□□□□ -0.79
ACTN1-221ENST00000556571 TBC1D28Q2M2D7 210 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SLC36A2Q495M3 483 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 MIDNQ504T8 468 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 DHRS4L2Q6PKH6 230 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 WDR88Q6ZMY6 472 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SYT14Q8NB59 555 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 OR6X1Q8NH79 312 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 ST7LQ8TDW4 575 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 CCL17Q92583 94 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 POP5Q969H6 163 aaKnown RBP10.09□□□□□ -0.79
ACTN1-221ENST00000556571 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SH3GL3Q99963 347 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 EBF4Q9BQW3 602 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 SPATA5L1Q9BVQ7 753 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 TMEM38BQ9NVV0 291 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 TESQ9UGI8 421 aaKnown RBP10.09□□□□□ -0.79
ACTN1-221ENST00000556571 NUP50Q9UKX7 468 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 CACNG2Q9Y698 323 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 ARHGAP32A7KAX9 2087 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 VWFP04275 2813 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 A0A0B4J2E0 115 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 IQCMA0A1B0GVH7 501 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 A0A1B0GX12 115 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 DNAJC9-AS1A6NH13 148 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 CLIC1O00299 241 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 DHHO43323 396 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 MFN2O95140 757 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 OR6A2O95222 327 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 ADORA3P0DMS8 318 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 ZNF81P51508 661 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 BAMBIQ13145 260 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 OR1Q1Q15612 314 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 NRN1LQ496H8 165 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 ARMCX4Q5H9R4 360 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 LRFN4Q6PJG9 635 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 SLC35D2Q76EJ3 337 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 SLC16A14Q7RTX9 510 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 KRT73Q86Y46 540 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 ICA1LQ8NDH6 482 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 CPEB3Q8NE35 698 aaKnown RBP10.08□□□□□ -0.8
ACTN1-221ENST00000556571 OR9I1Q8NGQ6 314 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 OR5J2Q8NH18 312 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 ZNF566Q969W8 418 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 DUX5Q96PT3 197 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 TMEM43Q9BTV4 400 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 C1QTNF5Q9BXJ0 243 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 RSPO3Q9BXY4 272 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-221ENST00000556571 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 PLEK2Q9NYT0 353 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 UBAP1Q9NZ09 502 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 CCDC167Q9P0B6 97 aa10.08□□□□□ -0.8
ACTN1-221ENST00000556571 PLSCR5A0PG75 271 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 ISPDA4D126 451 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 PRORSD1PA6NEY8 169 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 LRRN3E7EW58 273 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 C11orf98E9PRG8 122 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 CLDN34H7C241 214 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 MGRN1O60291 552 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 UBOX5O94941 541 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 MAKP20794 623 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 ZFP36P26651 326 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 MRPL19P49406 292 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 RGS8P57771 180 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 GLO1Q04760 184 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 AGKQ53H12 422 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 REEP3Q6NUK4 255 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 COMTD1Q86VU5 262 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 RBM15BQ8NDT2 890 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 DEFB108BQ8NET1 73 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 BHLHE22Q8NFJ8 381 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 OR4K5Q8NGD3 323 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 OR1J1Q8NGS3 322 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 STON2Q8WXE9 905 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 GTF3AQ92664 365 aaKnown RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 GTF2H4Q92759 462 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 SLC25A28Q96A46 364 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 SPDL1Q96EA4 605 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-221ENST00000556571 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
ACTN1-221ENST00000556571 EVA1AQ9H8M9 152 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms