RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TMEM239Q8WW34 195 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 ASB10Q8WXI3 467 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 C1orf159Q96HA4 380 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF583Q96ND8 569 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 MRPL13Q9BYD1 178 aaKnown RBP19.38■□□□□ 0.69
ACTN1-220ENST00000556433 POLR2J2Q9GZM3 115 aaKnown RBP19.38■□□□□ 0.69
ACTN1-220ENST00000556433 POLR2J3Q9H1A7 115 aaKnown RBP19.38■□□□□ 0.69
ACTN1-220ENST00000556433 OR51B6Q9H340 312 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 C1orf198Q9H425 327 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 INIPQ9NRY2 104 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 C20orf141Q9NUB4 165 aa19.38■□□□□ 0.69
ACTN1-220ENST00000556433 MRASO14807 208 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 NPPAP01160 153 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 PTHP01270 115 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 H2AFXP16104 143 aaPredicted RBP19.37■□□□□ 0.69
ACTN1-220ENST00000556433 ACHEP22303 614 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 OR1E2P47887 323 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 DAP3P51398 398 aaKnown RBP19.37■□□□□ 0.69
ACTN1-220ENST00000556433 ARFIP2P53365 341 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 SELENOVP59797 346 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 PLP2Q04941 152 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 SF3A3Q12874 501 aaKnown RBP eCLIP19.37■□□□□ 0.696e-36■■■■□ 21.7
ACTN1-220ENST00000556433 NKPD1Q17RQ9 610 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 NRN1LQ496H8 165 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 COQ5Q5HYK3 327 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 LRRC18Q8N456 261 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 NOXO1Q8NFA2 376 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 OR1J2Q8NGS2 313 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 C10orf82Q8WW14 230 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 LRMDAQ9H2I8 198 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 MRGBPQ9NV56 204 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 TAAR3PQ9P1P4 343 aa19.37■□□□□ 0.69
ACTN1-220ENST00000556433 LOC100653049A0A140TA62 436 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 IQCMA0A1B0GVH7 501 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 CENPBD1B2RD01 187 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 KRT34O76011 436 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 CLPTM1O96005 669 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 IGF2P01344 180 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 LCKP06239 509 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 TROVE2P10155 538 aaKnown RBP eCLIP19.36■□□□□ 0.69
ACTN1-220ENST00000556433 SRP14P37108 136 aaKnown RBP19.36■□□□□ 0.69
ACTN1-220ENST00000556433 TMEM33P57088 247 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 LAPTM4AQ15012 233 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 TBC1D28Q2M2D7 210 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 HDDC2Q7Z4H3 204 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 RBM15BQ8NDT2 890 aaKnown RBP19.36■□□□□ 0.69
ACTN1-220ENST00000556433 MOSPD2Q8NHP6 518 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 SYNPRQ8TBG9 265 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 YIPF5Q969M3 257 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 SEPHS2Q99611 448 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 C19orf24Q9BVV8 132 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 SAR1AQ9NR31 198 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 GPR160Q9UJ42 338 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 MED31Q9Y3C7 131 aa19.36■□□□□ 0.69
ACTN1-220ENST00000556433 BBIP1A8MTZ0 92 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 THRBP10828 461 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 RAD52P43351 418 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 DVL1P1P54792 670 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-220ENST00000556433 UCP2P55851 309 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 MAPRE2Q15555 327 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 CYBRD1Q53TN4 286 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 ARMC4Q5T2S8 1044 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 CLDND2Q8NHS1 167 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF519Q8TB69 540 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 LIPHQ8WWY8 451 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 C11orf40Q8WZ69 217 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 KCNN2Q9H2S1 579 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 NARFLQ9H6Q4 476 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 SIAEQ9HAT2 523 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 HINT3Q9NQE9 182 aaKnown RBP19.35■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF275Q9NSD4 429 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-220ENST00000556433 GID8Q9NWU2 228 aa19.35■□□□□ 0.69
ACTN1-220ENST00000556433 STX18Q9P2W9 335 aaKnown RBP19.35■□□□□ 0.69
ACTN1-220ENST00000556433 B4DSR2 109 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 PPIHO43447 177 aaKnown RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 MGRN1O60291 552 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 SASH3O75995 380 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 NCR1O76036 304 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 SNAP29O95721 258 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 MMP7P09237 267 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 SAGP10523 405 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF250P15622 560 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 KDELR2P33947 212 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 MAGEB1P43366 347 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 ZNF133P52736 654 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 KLF3P57682 345 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 ERVS71-1P61550 626 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 MRPS11P82912 194 aaKnown RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 HSF2Q03933 536 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 LRRC23Q53EV4 343 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-220ENST00000556433 C10orf128Q5T292 105 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 LIPNQ5VXI9 398 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 PCYOX1LQ8NBM8 494 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 ICA1LQ8NDH6 482 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 TPD52L3Q96J77 140 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 TSPAN32Q96QS1 320 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 BCL2L14Q9BZR8 327 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 FGFR1OP2Q9NVK5 253 aa19.34■□□□□ 0.69
ACTN1-220ENST00000556433 IGLV3-9A0A075B6K5 115 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 C17orf100A8MU93 164 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms