RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 IL12AP29459 219 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 S100A3P33764 101 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 RPL14P50914 215 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ARFIP2P53365 341 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 CLNS1AP54105 237 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 LMO4P61968 165 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 MRPS11P82912 194 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 RAB39AQ14964 217 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 SLC9B1Q4ZJI4 515 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ELFN2Q5R3F8 820 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 NIPAL3Q6P499 406 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 SPATA21Q7Z572 469 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 VRK2Q86Y07 508 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 NUDCD3Q8IVD9 361 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 PEX5LQ8IYB4 626 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 CDK20Q8IZL9 346 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 KDM8Q8N371 416 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF781Q8N8C0 355 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 OR52P1PQ8NH57 321 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 SGMS2Q8NHU3 365 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 FAM216AQ8WUB2 273 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 CKAP2Q8WWK9 683 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 TMEM186Q96B77 213 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 TAPBPLQ9BX59 468 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 UNKLQ9H9P5 680 aaKnown RBP7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 GPR35Q9HC97 309 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 TBCCD1Q9NVR7 557 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ADPRHL2Q9NX46 363 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 RCE1Q9Y256 329 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 RAP2CQ9Y3L5 183 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 CMAHPQ9Y471 501 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 DSPPQ9NZW4 1301 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 SH3PXD2BA1X283 911 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 E9PBE3 544 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 BIRC5O15392 142 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 FRS3O43559 492 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 PNMTP11086 282 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 LBPP18428 481 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 GLRXP35754 106 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 CDKN2CP42773 168 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 ANXA11P50995 505 aaKnown RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 CLDN17P56750 224 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 ABCE1P61221 599 aaKnown RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 COPZ1P61923 177 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 UFM1P61960 85 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 HPCAP84074 193 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 LRRC74AQ0VAA2 488 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 DAG1Q14118 895 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 RNF220Q5VTB9 566 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 PRAMEF8Q5VWM4 474 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 PRAMEF7Q5VXH5 474 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF836Q6ZNA1 936 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF621Q6ZSS3 439 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 MDP1Q86V88 176 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 CARM1Q86X55 608 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 TMEM123Q8N131 208 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 TRIML2Q8N7C3 387 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 PKD1L1Q8TDX9 2849 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 SLC38A5Q8WUX1 472 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 RDH5Q92781 318 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 SLC35B4Q969S0 331 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 MRPL24Q96A35 216 aaKnown RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 PPP1R36Q96LQ0 422 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 ALKBH3Q96Q83 286 aaPredicted RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 SORT1Q99523 831 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 RSPO3Q9BXY4 272 aaPredicted RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 MRPL37Q9BZE1 423 aaKnown RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 METTL17Q9H7H0 456 aaPredicted RBP7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 MEAF6Q9HAF1 191 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 NOX3Q9HBY0 568 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 HIF1ANQ9NWT6 349 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 TRRAPQ9Y4A5 3859 aa7.65□□□□□ -1.18
GTF2A1-204ENST00000556268 A0A0G2JPF8 293 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ZAR1LA6NP61 321 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ZNF99A8MXY4 864 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 HNRNPCL2B2RXH8 293 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 HNRNPCL3B7ZW38 293 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 FAM157AC9JC47 383 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 MS4A18H0YCH9 400 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 WNT9BO14905 357 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 SLC43A1O75387 559 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 KRT75O95678 551 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 SERPINE1P05121 402 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ALDOCP09972 364 aaKnown RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ZCCHC18P0CG32 403 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 HNRNPCL4P0DMR1 293 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ZNF14P17017 642 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 ZNF43P17038 809 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 PDCD2Q16342 344 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 CEACAM16Q2WEN9 425 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 MS4A18Q3C1V0 323 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 LIN52Q52LA3 116 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 PHYHD1Q5SRE7 291 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 H1FNTQ75WM6 255 aaPredicted RBP7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 GLCCI1Q86VQ1 547 aa7.64□□□□□ -1.19
GTF2A1-204ENST00000556268 C20orf196Q8IYI0 205 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms