RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CALHM2Q9HA72 323 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 RASSF1Q9NS23 344 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 PAK1IP1Q9NWT1 392 aaPredicted RBP6.91□□□□□ -1.3
PCNX4-210ENST00000555740 KLHL9Q9P2J3 617 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF835Q9Y2P0 537 aa6.91□□□□□ -1.3
PCNX4-210ENST00000555740 AHRRA9YTQ3 701 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 XKRYO14609 159 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 FAM20BO75063 409 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 WDR1O75083 606 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 TRMUO75648 421 aaKnown RBP6.9□□□□□ -1.3
PCNX4-210ENST00000555740 BCL10O95999 233 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 IGHG1P01857 330 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 IGHA1P01876 353 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 HTR1AP08908 422 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF43P17038 809 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 NOS3P29474 1203 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 BLVRAP53004 296 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 MLLT10P55197 1068 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 CDH11P55287 796 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 LGALS3BPQ08380 585 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 C1DQ13901 141 aaKnown RBP6.9□□□□□ -1.3
PCNX4-210ENST00000555740 LINC01590Q5TEZ4 76 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 PLBD1Q6P4A8 553 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 LEG1Q6P5S2 330 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 DNM1P34Q6PK57 102 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 C20orf196Q8IYI0 205 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 POMGNT2Q8NAT1 580 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 CLRN3Q8NCR9 226 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 BBS1Q8NFJ9 593 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 OR2T4Q8NH00 348 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 FAR1Q8WVX9 515 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 PTP4A1Q93096 173 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 SLC25A44Q96H78 314 aaPredicted RBP6.9□□□□□ -1.3
PCNX4-210ENST00000555740 HCAR1Q9BXC0 346 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
PCNX4-210ENST00000555740 LINC00470Q9BZP3 86 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 EXO5Q9H790 373 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 SCN3BQ9NY72 215 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 CAMK2AQ9UQM7 478 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 GPR52Q9Y2T5 361 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 PCDHGB1Q9Y5G3 927 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 ZNF407Q9C0G0 2248 aa6.9□□□□□ -1.3
PCNX4-210ENST00000555740 OR6C65A6NJZ3 312 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 NPIPA2E9PIF3 369 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 F8W735 103 aaPredicted RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 NPIPA3F8WFD2 350 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 GLCEO94923 617 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 CDK1P06493 297 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 GAAP10253 952 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 AHCYP23526 432 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 BIDP55957 195 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 MELKQ14680 651 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 SMN1Q16637 294 aaKnown RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 EIF2S3LQ2VIR3 472 aaKnown RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 RIPPLY2Q5TAB7 128 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 NSUN5P2Q63ZY6 315 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 SLC25A47Q6Q0C1 308 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 PRSS48Q7RTY5 328 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 UBQLNLQ8IYU4 475 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 FAM57AQ8TBR7 257 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 RNF141Q8WVD5 230 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 GGHQ92820 318 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 DNAJA3Q96EY1 480 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 ZFP3Q96NJ6 502 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 NMNAT3Q96T66 252 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 CDCA4Q9BXL8 241 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 ZNF71Q9NQZ8 489 aaPredicted RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 INPP5EQ9NRR6 644 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 C14orf119Q9NWQ9 140 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 DIMT1Q9UNQ2 313 aaKnown RBP6.9□□□□□ -1.31
PCNX4-210ENST00000555740 PKD1L2Q7Z442 2459 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 CNTRLQ7Z7A1 2325 aa6.9□□□□□ -1.31
PCNX4-210ENST00000555740 ITPR1Q14643 2758 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 A0A087WXM4 84 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 IGHV3-15A0A0B4J1V0 119 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 A0A1B0GTH9 108 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 PLGP00747 810 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 HRGP04196 525 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 SCG5P05408 212 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 GABRA1P14867 456 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 CRABP1P29762 137 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 HOXC12P31275 282 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MTNR1AP48039 350 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 RUNX1T1Q06455 604 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 RASGEF1BQ0VAM2 473 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 PON3Q15166 354 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 TBCEQ15813 527 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 KCNMB1Q16558 191 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 KLHL22Q53GT1 634 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 THEM4Q5T1C6 240 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 TMEM225Q6GV28 225 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 EGFL6Q8IUX8 553 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
PCNX4-210ENST00000555740 MYDGFQ969H8 173 aa6.89□□□□□ -1.31
PCNX4-210ENST00000555740 LGALS12Q96DT0 336 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms