RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SMURF1Q9HCE7 757 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 EXOSC4Q9NPD3 245 aaKnown RBP8.8□□□□□ -1
PSEN1-213ENST00000555386 TIGARQ9NQ88 270 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 COQ3Q9NZJ6 369 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 Q9UFV3 132 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 MCTS1Q9ULC4 181 aaKnown RBP8.8□□□□□ -1
PSEN1-213ENST00000555386 SLC7A7Q9UM01 511 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 ADGRG4Q8IZF6 3080 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 ALPK2Q86TB3 2170 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 UNC119BA6NIH7 251 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ETV2O00321 342 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 TBX1O43435 398 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 AQP8O94778 261 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 TOXO94900 526 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 PLGP00747 810 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 IGHA1P01876 353 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 HOXD4P09016 255 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 TMIGD3P0DMS9 266 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 BMP5P22003 454 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ENPP1P22413 925 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 GALP22466 123 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 FGF9P31371 208 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 GABRA5P31644 462 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 RPS19P39019 145 aaKnown RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 RPS5P46782 204 aaKnown RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 DIO1P49895 249 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
PSEN1-213ENST00000555386 BDH1Q02338 343 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 FOXF2Q12947 444 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 DOC2BQ14184 412 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 OR7A5Q15622 319 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 STEAP3Q658P3 488 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 MTFR2Q6P444 385 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ZNF613Q6PF04 617 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ULK3Q6PHR2 472 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 CD200R1LQ6Q8B3 271 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 MCEMP1Q8IX19 187 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 NAXEQ8NCW5 288 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 OR52L1Q8NGH7 329 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 OR52N1Q8NH53 320 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 SETD6Q8TBK2 473 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 SSC4DQ8WTU2 575 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 CA5BP1Q8WTZ4 195 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 SLC25A43Q8WUT9 341 aaPredicted RBP8.79□□□□□ -1
PSEN1-213ENST00000555386 SLC25A46Q96AG3 418 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ADGRG7Q96K78 797 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 PRSS27Q9BQR3 290 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 CALHM2Q9HA72 323 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ABCB10Q9NRK6 738 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 KLHL13Q9P2N7 655 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 CLCF1Q9UBD9 225 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 ZNF229Q9UJW7 825 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 GSTK1Q9Y2Q3 226 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 DOPEY1Q5JWR5 2465 aa8.79□□□□□ -1
PSEN1-213ENST00000555386 A0A0B4J2E0 115 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 A0A1B0GX12 115 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 NKX2-6A6NCS4 301 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CD8B2A6NJW9 211 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 A8MVM7 634 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 AKAP8O43823 692 aaKnown RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 RCBTB2O95199 551 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 LIMS3P0CW19 117 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 LIMS4P0CW20 117 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 PNMTP11086 282 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CAPZA2P47755 286 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 SLC9A3P48764 834 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 MMP16P51512 607 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CTBP2P56545 445 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 GPR50Q13585 617 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CDSNQ15517 529 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 ZNF239Q16600 458 aaKnown RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 C1orf140Q5VVS0 124 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 LIPKQ5VXJ0 399 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 PAQR6Q6TCH4 344 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 WDR88Q6ZMY6 472 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 TMPPEQ6ZT21 453 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 TMPRSS11FQ6ZWK6 438 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 SNX29P2Q8IUI4 249 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 LIX1LQ8IVB5 337 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CDK20Q8IZL9 346 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 KLHL36Q8N4N3 616 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 LSMEM1Q8N8F7 131 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 POC5Q8NA72 575 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 PLPP7Q8NBV4 271 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 ZNF485Q8NCK3 441 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 OR4Q3Q8NH05 313 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 ABHD3Q8WU67 409 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 CHAC2Q8WUX2 184 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 TMEM255BQ8WV15 326 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 DNAJA4Q8WW22 397 aaPredicted RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 TMEM239Q8WW34 195 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 ITLN2Q8WWU7 325 aaPredicted RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 AP3S1Q92572 193 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 WNT2BQ93097 391 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 KTI12Q96EK9 354 aaPredicted RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 KCTD7Q96MP8 289 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 TM9SF2Q99805 663 aa8.78□□□□□ -1
PSEN1-213ENST00000555386 TXNL4BQ9NX01 149 aaKnown RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 H2AFY2Q9P0M6 372 aaPredicted RBP8.78□□□□□ -1
PSEN1-213ENST00000555386 BAIAP2Q9UQB8 552 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms