RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC2A10O95528 541 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 IGLV1-44P01699 117 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 SOD3P08294 240 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 HOXB6P17509 224 aaKnown RBP10.53□□□□□ -0.72
SRP54-206ENST00000555317 NPR2P20594 1047 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 TTKP33981 857 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 OMPP47874 163 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 LIMS1P48059 325 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 GIPRP48546 466 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 RPS6KA3P51812 740 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 NAAAQ02083 359 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 FLOT2Q14254 428 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 HIST3H3Q16695 136 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 THEM4Q5T1C6 240 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 C10orf128Q5T292 105 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 SMARCD3Q6STE5 483 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 LURAP1LQ8IV03 231 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 ARIH2OSQ8N7S6 290 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
SRP54-206ENST00000555317 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 SH3GL3Q99963 347 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 GSX2Q9BZM3 304 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 REEP1Q9H902 201 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 ADAM18Q9Y3Q7 739 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 SPEF1Q9Y4P9 236 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 MGRN1O60291 552 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 CCNB2O95067 398 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 CELA3BP08861 270 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 DANCRP0C864 163 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 RAP2AP10114 183 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 FPR3P25089 353 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SDHAP31040 664 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SLC6A6P31641 620 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 APOBEC3AP31941 199 aaPredicted RBP10.52□□□□□ -0.73
SRP54-206ENST00000555317 MAGEA2P43356 314 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 RAB1AP62820 205 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 MS4A2Q01362 244 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 GALK2Q01415 458 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 PLP2Q04941 152 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 FMODQ06828 376 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 KRR1Q13601 381 aaKnown RBP10.52□□□□□ -0.73
SRP54-206ENST00000555317 SGCAQ16586 387 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 PGGHGQ32M88 737 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 IQCCQ4KMZ1 466 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 GPR139Q6DWJ6 353 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 VHLLQ6RSH7 139 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 B3GLCTQ6Y288 498 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 YTHDF3Q7Z739 585 aaKnown RBP10.52□□□□□ -0.73
SRP54-206ENST00000555317 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SPATA24Q86W54 205 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 TGIF2LYQ8IUE0 185 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SKA3Q8IX90 412 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 LRRC18Q8N456 261 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 LRRC75AQ8NAA5 344 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 OR52L1Q8NGH7 329 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 ZNF519Q8TB69 540 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 GNPDA2Q8TDQ7 276 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 TRAF4Q9BUZ4 470 aaPredicted RBP10.52□□□□□ -0.73
SRP54-206ENST00000555317 YY1AP1Q9H869 796 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SEC61A2Q9H9S3 476 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SIAEQ9HAT2 523 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 CCNB1IP1Q9NPC3 277 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 CBLN4Q9NTU7 201 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 IL20RAQ9UHF4 553 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SIGLEC7Q9Y286 467 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 SAMHD1Q9Y3Z3 626 aaKnown RBP10.52□□□□□ -0.73
SRP54-206ENST00000555317 LYVE1Q9Y5Y7 322 aa10.52□□□□□ -0.73
SRP54-206ENST00000555317 IGHV2OR16-5A0A0B4J2B6 119 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 TEX13CA0A0J9YWL9 993 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 IQCMA0A1B0GVH7 501 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 A0A1W2PPL8 197 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 DHRS12A0PJE2 317 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 ZNF503-AS2A6NEH8 195 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 AQP12BA6NM10 295 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 H7C1C5 153 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 GNGT2O14610 69 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 AHCYL1O43865 530 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 PTHP01270 115 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 NOS3P29474 1203 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 CDKN1AP38936 164 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 SNRPD2P62316 118 aaKnown RBP10.51□□□□□ -0.73
SRP54-206ENST00000555317 LCN6P62502 163 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 ADAM8P78325 824 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 MRPS34P82930 218 aaKnown RBP10.51□□□□□ -0.73
SRP54-206ENST00000555317 HSF2Q03933 536 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 FHL1Q13642 323 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 DAG1Q14118 895 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 OR2T5Q6IEZ7 315 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 ZER1Q7Z7L7 766 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 ADCK1Q86TW2 530 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 JAZF1Q86VZ6 243 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 AQP12AQ8IXF9 295 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 OR2T29Q8NH02 315 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 RASD2Q96D21 266 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 Q96M85 177 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
SRP54-206ENST00000555317 FUZQ9BT04 418 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms