RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 USP47Q96K76 1375 aa2.08□□□□□ -2.08
SCFD1-213ENST00000554776 MEGF6O75095 1541 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SCN2AQ99250 2005 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SPECC1L-ADORA2AF8WAN1 911 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 H0Y9J4 135 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 WRBO00258 174 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 DYNC1I1O14576 645 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SLC31A2O15432 143 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CACNG3O60359 315 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 DPM1O60762 260 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 EEDO75530 441 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 UTS2O95399 124 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 KRT14P02533 472 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ACSM4P0C7M7 580 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 OR8G3PP0DMU2 310 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 TDGF1P13385 188 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF30P17039 623 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 AK4P27144 223 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 DCKP27707 260 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 LHX2P50458 406 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 TDGF1P3P51864 188 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CRISP1P54107 249 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CRISP3P54108 245 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SLC25A11Q02978 314 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 LIPEQ05469 1076 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CAPRIN1Q14444 709 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 VAX1Q5SQQ9 334 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 C9orf135Q5VTT2 229 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SPECC1LQ69YQ0 1117 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 C22orf42Q6IC83 251 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 REEP3Q6NUK4 255 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 BZW1Q7L1Q6 419 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CENPQQ7L2Z9 268 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 PDIK1LQ8N165 341 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF433Q8N7K0 673 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 PRELID2Q8N945 189 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 BPIFCQ8NFQ6 507 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CAPSLQ8WWF8 208 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 PIBF1Q8WXW3 757 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 MCUR1Q96AQ8 359 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ELSPBP1Q96BH3 223 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ECHDC3Q96DC8 303 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 AURKBQ96GD4 344 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 NRTNQ99748 197 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 KCTD14Q9BQ13 255 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 TEKT3Q9BXF9 490 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CDC42EP4Q9H3Q1 356 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 EXO5Q9H790 373 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 CTPS2Q9NRF8 586 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 SAMSN1Q9NSI8 373 aaKnown RBP2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ADAM22Q9P0K1 906 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 ST3GAL6Q9Y274 331 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 NFASCO94856 1347 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 TTC41PQ6P2S7 1318 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 MAP3K15Q6ZN16 1313 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 INSRP06213 1382 aa2.07□□□□□ -2.08
SCFD1-213ENST00000554776 TRBV11-1A0A0K0K1C0 115 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 GLYATL1P3A0A0U1RQE8 302 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 A0A1B0GUA9 196 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 A0A1B0GW55 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 PRSS37A4D1T9 235 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 FAM166BA8MTA8 275 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 C11orf94C9JXX5 98 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 H3BNH8 94 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CDC7O00311 574 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 OR2F2O95006 317 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 AIFM1O95831 613 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 ASGR1P07306 291 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L2P0CJ85 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L3P0CJ86 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L5P0CJ88 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L6P0CJ89 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L7P0CJ90 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 IGHV3-43DP0DP04 118 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CALM1P0DP23 149 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CALM2P0DP24 149 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CALM3P0DP25 149 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 SFTPCP11686 197 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 MGMTP16455 207 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CRISP2P16562 243 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 BCKDHBP21953 392 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 RRM2P31350 389 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 SERPINB5P36952 375 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 AQP2P41181 271 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 UQCRFS1P47985 274 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 NMUP48645 174 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF133P52736 654 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-213ENST00000554776 UGT2B15P54855 530 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 WNT4P56705 351 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 KRTAP10-8P60410 259 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 PAX5Q02548 391 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 PTPN20Q4JDL3 420 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 PIGGQ5H8A4 983 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM53Q6P2H8 277 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DNAJC24Q6P3W2 148 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4L9Q6RFH8 374 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-213ENST00000554776 Q6ZVH6 145 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 ARIH2OSQ8N7S6 290 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 BBOF1Q8ND07 529 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms