RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 DIMT1Q9UNQ2 313 aaKnown RBP11.02□□□□□ -0.65
SHMT2-214ENST00000554604 CADP27708 2225 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 A0A1B0GWA3 101 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 SURF4O15260 269 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 CLPXO76031 633 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 RAB36O95755 333 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 IFI30P13284 250 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 HTR3AP46098 478 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 DIO1P49895 249 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 RASGEF1BQ0VAM2 473 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 DCTN2Q13561 401 aaKnown RBP11.01□□□□□ -0.65
SHMT2-214ENST00000554604 MOGQ16653 247 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 STAC2Q6ZMT1 411 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
SHMT2-214ENST00000554604 GRINAQ7Z429 371 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 MEX3DQ86XN8 651 aaKnown RBP11.01□□□□□ -0.65
SHMT2-214ENST00000554604 OR2T33Q8NG76 320 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 MND1Q9BWT6 205 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 PLGRKTQ9HBL7 147 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 CHRNA9Q9UGM1 479 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 ERGIC3Q9Y282 383 aa11.01□□□□□ -0.65
SHMT2-214ENST00000554604 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
SHMT2-214ENST00000554604 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
SHMT2-214ENST00000554604 HTR3EA5X5Y0 456 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 DEFB108AA8MXU0 73 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 M0R3G1 203 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 CDC42EP2O14613 210 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 AIREO43918 545 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ADRA2AP08913 450 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 INHBBP09529 407 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 PSMB1P20618 241 aaKnown RBP11□□□□□ -0.65
SHMT2-214ENST00000554604 MAKP20794 623 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 NR4A1P22736 598 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 FKBP2P26885 142 aaKnown RBP11□□□□□ -0.65
SHMT2-214ENST00000554604 SERPINB10P48595 397 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 RGS6P49758 472 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 RAB40BQ12829 278 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 DGUOKQ16854 277 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ARMCX4Q5H9R4 360 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ULK3Q6PHR2 472 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 TFAP2EQ6VUC0 442 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 TMPPEQ6ZT21 453 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 NANOGP1Q8N7R0 232 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 PROKR2Q8NFJ6 384 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 OR52I1Q8NGK6 324 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 DYNC2LI1Q8TCX1 351 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 RFKQ969G6 155 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 MBD6Q96DN6 1003 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 BPIFA2Q96DR5 249 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 LGALS12Q96DT0 336 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 PLEKHA8Q96JA3 519 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 SAMD8Q96LT4 415 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 MGLLQ99685 303 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 HDHD5Q9BXW7 423 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 ACTR6Q9GZN1 396 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 CXXC4Q9H2H0 198 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 OR52D1Q9H346 318 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 FN3KQ9H479 309 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 GPR52Q9Y2T5 361 aa11□□□□□ -0.65
SHMT2-214ENST00000554604 TMED7-TICAM2A0A0A6YYA0 188 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 A0A1W2PPR1 153 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 EFCAB9A8MZ26 197 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 SMAD9O15198 467 aaKnown RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 SIAH2O43255 324 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CYTIPO60759 359 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 ADAM11O75078 769 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 IL32P24001 234 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 GADD45AP24522 165 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CLK1P49759 484 aaKnown RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 POLR2HP52434 150 aaKnown RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 VBP1P61758 197 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TUBA1BP68363 451 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 MED22Q15528 200 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 DEFB113Q30KQ7 82 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TIMM50Q3ZCQ8 353 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 ALG10BQ5I7T1 473 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CLEC12AQ5QGZ9 265 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 AADACL4Q5VUY2 407 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 C22orf34Q6ZV56 151 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TUBA1AQ71U36 451 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 BCDIN3DQ7Z5W3 292 aaKnown RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 LSRQ86X29 649 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CXorf67Q86X51 503 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 WFDC8Q8IUA0 241 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CROCCP3Q8IVE0 287 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 LNX2Q8N448 690 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 STEAP2Q8NFT2 490 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 PFN4Q8NHR9 129 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 DNAJA4Q8WW22 397 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 ZNF775Q96BV0 537 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 DNAJA3Q96EY1 480 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 OR5M11Q96RB7 305 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TAPBPLQ9BX59 468 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms