RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 KCNA7Q96RP8 456 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 CNPY3Q9BT09 278 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 MED10Q9BTT4 135 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 CHID1Q9BWS9 393 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ANGPTL4Q9BY76 406 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 UCK2Q9BZX2 261 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 GBA3Q9H227 469 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PIGUQ9H490 435 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 RBAKQ9NYW8 714 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 EMC3Q9P0I2 261 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 APOBEC3BQ9UH17 382 aaKnown RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PSMD13Q9UNM6 376 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 COPS3Q9UNS2 423 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 METP08581 1390 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 USP6P35125 1406 aa3.59□□□□□ -1.84
SCFD1-211ENST00000554437 A0A1B0GW15 77 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 EPOPA6NHQ4 379 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 TRDCB7Z8K6 153 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 FCN1O00602 326 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 TOR1AO14656 332 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ITGB1BP1O14713 200 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 SLC19A2O60779 497 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 TOM1O60784 492 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ENTPD5O75356 428 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 VAPBO95292 243 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 C1orf105O95561 183 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 RPN2P04844 631 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CCDC166P0CW27 439 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 PSMB6P28072 239 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 FGF9P31371 208 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 GPR1P46091 355 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CCNHP51946 323 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 STX17P56962 302 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 RPL8P62917 257 aaKnown RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF33AQ06730 810 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 GNA13Q14344 377 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 TIGITQ495A1 244 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 SAMD4BQ5PRF9 694 aaKnown RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF57Q68EA5 555 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CERS6Q6ZMG9 384 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 SLC25A48Q6ZT89 311 aaKnown RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 SLC35D2Q76EJ3 337 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ABHD12BQ7Z5M8 362 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 C9orf40Q8IXQ3 194 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 TRAM1L1Q8N609 369 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 NUBPLQ8TB37 319 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CAPSLQ8WWF8 208 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 MRPS31Q92665 395 aaKnown RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 GTF2H4Q92759 462 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 CDKL2Q92772 493 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 MYDGFQ969H8 173 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ISOC2Q96AB3 205 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 APH1AQ96BI3 265 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 RNF170Q96K19 258 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF514Q96K75 400 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ECSITQ9BQ95 431 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 MAP1LC3CQ9BXW4 147 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 NEUROG2Q9H2A3 272 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 REEP4Q9H6H4 257 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 LRRC19Q9H756 370 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 PRSS16Q9NQE7 514 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 STMN3Q9NZ72 180 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 KIF25Q9UIL4 384 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 FLVCR1Q9Y5Y0 555 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ADCY9O60503 1353 aa3.58□□□□□ -1.84
SCFD1-211ENST00000554437 ZFP92A6NM28 416 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 IDSB3KWA1 339 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 GOSR2O14653 212 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 HSD17B6O14756 317 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ZW10O43264 779 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 OR7A10O76100 309 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 OXSR1O95747 527 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CST4P01036 141 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 UBTFL1P0CB47 393 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 PNMA6AP0CW24 399 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 TCN1P20061 433 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 COX5AP20674 150 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 FOXN2P32314 431 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 VHLP40337 213 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 P2RY2P41231 377 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 DAP3P51398 398 aaKnown RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 RIPK4P57078 832 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 UBE2G2P60604 165 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 DMC1Q14565 340 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 GNMTQ14749 295 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 TSC22D1Q15714 1073 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CYP51A1Q16850 503 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 DGUOKQ16854 277 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SPESP1Q6UW49 350 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 TMIGD1Q6UXZ0 262 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 TMPRSS11AQ6ZMR5 421 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF836Q6ZNA1 936 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 ASCL5Q7RTU5 278 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 CDKL3Q8IVW4 592 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SLC34A3Q8N130 599 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 SYS1Q8N2H4 156 aa3.57□□□□□ -1.84
SCFD1-211ENST00000554437 MS4A15Q8N5U1 240 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms