RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SH3BGRLO75368 114 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 B3GALNT1O75752 331 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 AQP8O94778 261 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 IGF2P01344 180 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 GBAP04062 536 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ATP1B1P05026 303 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 IGFBP1P08833 259 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 UCHL1P09936 223 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SBK2P0C263 348 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 PRG2P13727 222 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 RPS4Y1P22090 263 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NDUFS1P28331 727 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CMPK1P30085 196 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 TLX1P31314 330 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC6A6P31641 620 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 TGM4P49221 684 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF81P51508 661 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CLDN2P57739 230 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 RPS21P63220 83 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NHLH2Q02577 135 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CAMK2DQ13557 499 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 EXOSC2Q13868 293 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 KLF9Q13886 244 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 LASP1Q14847 261 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 IRF4Q15306 451 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 TOMM20Q15388 145 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF791Q3KP31 576 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ARHGAP11BQ3KRB8 267 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC36A2Q495M3 483 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC30A6Q6NXT4 461 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 PARS2Q7L3T8 475 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SZRD1Q7Z422 152 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 GDF7Q7Z4P5 450 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 HSD17B13Q7Z5P4 300 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 RBM45Q8IUH3 476 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CPOQ8IVL8 374 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NRMQ8IXM6 262 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CCDC36Q8IYA8 594 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR11H7Q8NGC8 314 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR51G2Q8NGK0 314 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR4Q3Q8NH05 313 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 GIMAP1Q8WWP7 306 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 FCAMRQ8WWV6 532 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 KAT2AQ92830 837 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SMIM19Q96E16 107 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SENP5Q96HI0 755 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 COX14Q96I36 57 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 BMFQ96LC9 184 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR7D2Q96RA2 312 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 F2RL3Q96RI0 385 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 STACQ99469 402 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CCDC3Q9BQI4 270 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF559Q9BR84 538 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 C1QTNF7Q9BXJ2 289 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC17A9Q9BYT1 436 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 DNTTIP1Q9H147 329 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 C20orf85Q9H1P6 137 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC38A1Q9H2H9 487 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR52D1Q9H346 318 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NARFLQ9H6Q4 476 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 WDR26Q9H7D7 661 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 HINT3Q9NQE9 182 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CTPS2Q9NRF8 586 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 DUSP22Q9NRW4 184 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 PARPBPQ9NWS1 579 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SIDT1Q9NXL6 827 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 TAS2R5Q9NYW4 299 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SH2B3Q9UQQ2 575 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF443Q9Y2A4 671 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 YARS2Q9Y2Z4 477 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 MED31Q9Y3C7 131 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CHST2Q9Y4C5 530 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SPACA6W5XKT8 324 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NUP210LQ5VU65 1888 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 A0A087WV62 115 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 A0A0G2JK05 382 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CLEC18AA5D8T8 446 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 POM121BA6NF01 834 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CPSF4LA6NMK7 179 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 D6RAR5 112 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LMO7DNF2Z398 122 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 L7N2F9 121 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 AIPO00170 330 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 B4GALT2O60909 372 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TSC22D2O75157 780 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 KHDRBS3O75525 346 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MTRF1O75570 445 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 RP2O75695 350 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 KRT33AO76009 404 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR2A4O95047 310 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SCAF4O95104 1147 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 EPPINO95925 133 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 PAK4O96013 591 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CTSLP07711 333 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CSF1P09603 554 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms