RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 CDH4P55283 916 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RAB4BP61018 213 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RPS24P62847 133 aaKnown RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RAD51Q06609 339 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ZNF33AQ06730 810 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 DDX39BQ13838 428 aaKnown RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 PDGFRLQ15198 375 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 LTB4RQ15722 352 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 CD226Q15762 336 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ZSWIM7Q19AV6 140 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 PARP15Q460N3 678 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 DNAL1Q4LDG9 190 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 FAM78AQ5JUQ0 283 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ACER2Q5QJU3 275 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RABGAP1LQ5R372 815 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ATAD3BQ5T9A4 648 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 FAM219BQ5XKK7 198 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 SEL1L3Q68CR1 1132 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 NCBP2-AS2Q69YL0 99 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 NIPAL1Q6NVV3 410 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RWDD4Q6NW29 188 aaKnown RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 LRRC8BQ6P9F7 803 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ATRAIDQ6UW56 229 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ISLR2Q6UXK2 745 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 TMEM26Q6ZUK4 368 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RANBP3LQ86VV4 465 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 BBS7Q8IWZ6 715 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 IFT20Q8IY31 132 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 UMODL1-AS1Q8N2C9 162 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 SNX31Q8N9S9 440 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ACTL9Q8TC94 416 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 KCTD4Q8WVF5 259 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ELSPBP1Q96BH3 223 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ANKRD9Q96BM1 317 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 WBP1Q96G27 269 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 CAPZA3Q96KX2 299 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 CYTH2Q99418 400 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 NDUFAF3Q9BU61 184 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 BBS2Q9BXC9 721 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 GON7Q9BXV9 100 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ATG10Q9H0Y0 220 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 POMKQ9H5K3 350 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ZFP14Q9HCL3 533 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 AMBNQ9NP70 447 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 MRPS30Q9NP92 439 aaKnown RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 TREM1Q9NP99 234 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 DIABLOQ9NR28 239 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ZNF581Q9P0T4 197 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 PSMC3IPQ9P2W1 217 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 DCDC2Q9UHG0 476 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 PCYOX1Q9UHG3 505 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 RNF24Q9Y225 148 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 CCL26Q9Y258 94 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 EIF3LQ9Y262 564 aaKnown RBP4.02□□□□□ -1.77
FOXN3-206ENST00000554005 SNX10Q9Y5X0 201 aa4.02□□□□□ -1.77
FOXN3-206ENST00000554005 ANAPC1Q9H1A4 1944 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 OBSL1O75147 1896 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 CXorf51AA0A1B0GTR3 108 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 SMIM31A0A1B0GVY4 71 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 GSAPA4D1B5 854 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 LINC00587B1AMM8 73 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 EI24O14681 340 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 CHADO15335 359 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 MFSD11O43934 449 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 CDH16O75309 829 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 STK17BO94768 372 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 NSA2O95478 260 aaKnown RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 SNAP29O95721 258 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 DHFRP00374 187 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 APOC1P02654 83 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 KRT16P08779 473 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 GFAPP14136 432 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 PSMC3P17980 439 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 RAB4AP20338 218 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 OR1E1P30953 314 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 SAA4P35542 130 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 COILP38432 576 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 CCT3P49368 545 aaKnown RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 ERFP50548 548 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 P2RY4P51582 365 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 MFAP2P55001 183 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 DYNLT1P63172 113 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 IFITM2Q01629 132 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 NAAAQ02083 359 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 ZNF85Q03923 595 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 FUT7Q11130 342 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 HTR4Q13639 388 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 SLC1A5Q15758 541 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 ACSF3Q4G176 576 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 LIN52Q52LA3 116 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 TEX30Q5JUR7 227 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 HES5Q5TA89 166 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 VITQ6UXI7 678 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 APOOLQ6UXV4 268 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 SETD3Q86TU7 594 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 RALGPS2Q86X27 583 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-206ENST00000554005 MFSD6LQ8IWD5 586 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 IQCKQ8N0W5 287 aa4.01□□□□□ -1.77
FOXN3-206ENST00000554005 MMGT1Q8N4V1 131 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms