RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 CIB4A0PJX0 185 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF99A8MXY4 864 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 SLC16A7O60669 478 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 KHDRBS3O75525 346 aaKnown RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 RAD51DO75771 328 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 IL32P24001 234 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 CRABP1P29762 137 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 CCKARP32238 428 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF84P51523 738 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 SLC25A1P53007 311 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 ARF1P84077 181 aaKnown RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 ETFDHQ16134 617 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 OR6V1Q8N148 313 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 C1orf162Q8NEQ5 155 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 STEAP2Q8NFT2 490 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 OR1K1Q8NGR3 316 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 S100PBPQ96BU1 408 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 PLEKHA8Q96JA3 519 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 HRASLS5Q96KN8 279 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 MUS81Q96NY9 551 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 TSSK2Q96PF2 358 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 RERGLQ9H628 205 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 SRA1Q9HD15 236 aaKnown RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 TMEM38BQ9NVV0 291 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 FAM118AQ9NWS6 357 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 NDRG4Q9ULP0 352 aaKnown RBP10.75□□□□□ -0.69
SHMT2-209ENST00000553949 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 UGT2A1Q9Y4X1 527 aa10.75□□□□□ -0.69
SHMT2-209ENST00000553949 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-209ENST00000553949 DOPEY1Q5JWR5 2465 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 A0A096LPE4 126 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 IGLV1-36A0A0B4J1U3 117 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 LOC100130705A0A1B0GUX0 176 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 A0A1W2PPZ6 126 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 FAM183AA6NL82 134 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 C19orf84I3L1E1 186 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 M0R129 80 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 DCTN6O00399 190 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 SLC16A6O15403 523 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 PRKYO43930 277 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 SEC14L2O76054 403 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 PAICSP22234 425 aaKnown RBP10.74□□□□□ -0.69
SHMT2-209ENST00000553949 GGT2P36268 569 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 CDC42P60953 191 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 EFNB1P98172 346 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 SORDQ00796 357 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 DBPQ10586 325 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-209ENST00000553949 GABRA6Q16445 453 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 OR7E24Q6IFN5 339 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 PLBD1Q6P4A8 553 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF813Q6ZN06 617 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF627Q7L945 461 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ZBTB46Q86UZ6 589 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF555Q8NEP9 628 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 OR9Q1Q8NGQ5 310 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 OR2T4Q8NH00 348 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 BCL2L2Q92843 193 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-209ENST00000553949 PTP4A1Q93096 173 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 OTULINQ96BN8 352 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 BOD1Q96IK1 185 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 PITX2Q99697 317 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 FOXB1Q99853 325 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 NMNAT2Q9BZQ4 307 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ACTR6Q9GZN1 396 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 OR10A4Q9H209 315 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 HINT3Q9NQE9 182 aaKnown RBP10.74□□□□□ -0.69
SHMT2-209ENST00000553949 GMPPBQ9Y5P6 360 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 FKBP7Q9Y680 259 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 ALPK2Q86TB3 2170 aa10.74□□□□□ -0.69
SHMT2-209ENST00000553949 A0A1W2PPL8 197 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 FAM171A2A8MVW0 826 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 PRSS44E7EML9 344 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 PRR23D1E9PI22 279 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 H0YJX3 145 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 TLX2O43763 284 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CLDN1O95832 211 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 PRR23D2P0DMB1 279 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CLUP10909 449 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 B4GALT1P15291 398 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 SPI1P17947 270 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 NPR2P20594 1047 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CDAP32320 146 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 PYCR1P32322 319 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 AQP4P55087 323 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 MRPS34P82930 218 aaKnown RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 SNTB1Q13884 538 aaKnown RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 KEAP1Q14145 624 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 TBRG1Q3YBR2 411 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 NRN1LQ496H8 165 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 KLHL24Q6TFL4 600 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 FOXL2NBQ6ZUU3 175 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CXXC5Q7LFL8 322 aaKnown RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CPOQ8IVL8 374 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 GLB1L2Q8IW92 636 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 C17orf78Q8N4C9 275 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 DHRSXQ8N5I4 330 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 TCEANCQ8N8B7 351 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms