RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CYP4Z2PQ8N1L4 340 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 NATD1Q8N6N6 113 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 MFSD9Q8NBP5 474 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 OR51G2Q8NGK0 314 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 NUBPLQ8TB37 319 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 AENQ8WTP8 325 aaKnown RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 DNASE2BQ8WZ79 361 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 AP3S1Q92572 193 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 NAT6Q93015 286 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 PSMG2Q969U7 264 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SMIM10Q96HG1 83 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CCDC42Q96M95 316 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 COPS8Q99627 209 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 MCRIP2Q9BUT9 160 aaKnown RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 TM2D1Q9BX74 207 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 HCAR1Q9BXC0 346 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 C1orf198Q9H425 327 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 GLIPR2Q9H4G4 154 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 JPT2Q9H910 190 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 EXOSC3Q9NQT5 275 aaKnown RBP3.08□□□□□ -1.92
TDP1-207ENST00000553617 SLC17A5Q9NRA2 495 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 STMN3Q9NZ72 180 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 IL36GQ9NZH8 169 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 STOML2Q9UJZ1 356 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 IKZF2Q9UKS7 526 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 CLEC4EQ9ULY5 219 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 SCML2Q9UQR0 700 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 OARD1Q9Y530 152 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 TIMM10BQ9Y5J6 103 aa3.08□□□□□ -1.92
TDP1-207ENST00000553617 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 A0A1W2PQ67 120 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 TRABD2BA6NFA1 517 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 CCT8L1PA6NM43 557 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 E9PQ18 207 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 CLOCKO15516 846 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 AQP9O43315 295 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 PRKAB2O43741 272 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GMDSO60547 372 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 HUS1O60921 280 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ENTPD5O75356 428 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 HPP00738 406 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 FGGP02679 453 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GP1BAP07359 652 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 CCDC166P0CW27 439 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ATP1B2P14415 290 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 PGAM1P18669 254 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 PMCHP20382 165 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GNPDA1P46926 289 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ERFP50548 548 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DUSP3P51452 185 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 ATP1B3P54709 279 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 LIM2P55344 173 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 CLDN18P56856 261 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ERVK-25P63136 954 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 OC90Q02509 493 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 RAD51Q06609 339 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 C2orf54Q08AI8 447 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DYNC1I2Q13409 638 aaKnown RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 IL18R1Q13478 541 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GK3PQ14409 553 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 PON3Q15166 354 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GUK1Q16774 197 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 NDUFA9Q16795 377 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 IMPG1Q17R60 797 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 TMEM249Q2WGJ8 235 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 SLC25A52Q3SY17 297 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 GLYR1Q49A26 553 aaPredicted RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 COX19Q49B96 90 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 TP53I3Q53FA7 332 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ZNF506Q5JVG8 444 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 BRMS1LQ5PSV4 323 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 METTL21CQ5VZV1 264 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 OR8G2PQ6IF36 304 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 TMUB2Q71RG4 321 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 H2BFWTQ7Z2G1 175 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DHDDSQ86SQ9 333 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 SPAG16Q8N0X2 631 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 Q8N377 158 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DHRSXQ8N5I4 330 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 LRRC75AQ8NAA5 344 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 CSNK1G2-AS1Q8NCQ2 148 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 SDR9C7Q8NEX9 313 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 OR5B17Q8NGF7 314 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 OR2L8Q8NGY9 312 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 OR52N1Q8NH53 320 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 FAM172AQ8WUF8 416 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DNAJB3Q8WWF6 145 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 NELFBQ8WX92 580 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 C10orf35Q96D05 121 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 TMEM80Q96HE8 168 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 SERPINB11Q96P15 392 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 PRRT1Q99946 306 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 UTP23Q9BRU9 249 aaKnown RBP3.07□□□□□ -1.92
TDP1-207ENST00000553617 NIPSNAP3BQ9BS92 247 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 NICN1Q9BSH3 213 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 DCUN1D5Q9BTE7 237 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 MAP1LC3CQ9BXW4 147 aa3.07□□□□□ -1.92
TDP1-207ENST00000553617 ILKAPQ9H0C8 392 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms