RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TMEM129A0AVI4 362 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 C11orf98E9PRG8 122 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 LYNX1G3V0Z9 82 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 KPNA4O00629 521 aaPredicted RBP10.16□□□□□ -0.78
SRP54-203ENST00000553544 NME4O00746 187 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 SHOX2O60902 331 aaPredicted RBP10.16□□□□□ -0.78
SRP54-203ENST00000553544 OR6A2O95222 327 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 CELA3BP08861 270 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 LYNX1P0DP58 116 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 CALCRP30988 508 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 ARR3P36575 388 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 GYS2P54840 703 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 UGT2B15P54855 530 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 BIDP55957 195 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 TAS2R41P59536 307 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 HGFACQ04756 655 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 LRRC23Q53EV4 343 aaPredicted RBP10.16□□□□□ -0.78
SRP54-203ENST00000553544 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
SRP54-203ENST00000553544 SLC35D2Q76EJ3 337 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 PIGWQ7Z7B1 504 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 MYPOPQ86VE0 399 aaPredicted RBP10.16□□□□□ -0.78
SRP54-203ENST00000553544 OR6N1Q8NGY5 312 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 TMEM255BQ8WV15 326 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 TMEM239Q8WW34 195 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 ZNF696Q9H7X3 374 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 DYNLRB1Q9NP97 96 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 SPAG4Q9NPE6 437 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 B3GAT2Q9NPZ5 323 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 GLTPQ9NZD2 209 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 ZNF224Q9NZL3 707 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 A4GNTQ9UNA3 340 aa10.16□□□□□ -0.78
SRP54-203ENST00000553544 SERPINI2O75830 405 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 SEC14L2O76054 403 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 HIST1H2ABP04908 130 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 MSMBP08118 114 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 ADRA2AP08913 450 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 FUT1P19526 365 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 FUT4P22083 530 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 CSNK1A1P48729 337 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 LIPEQ05469 1076 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 HIST3H3Q16695 136 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 SPATS1Q496A3 300 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 LRFN4Q6PJG9 635 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 C16orf89Q6UX73 402 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 ZNF813Q6ZN06 617 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 HIST3H2AQ7L7L0 130 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 MDP1Q86V88 176 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 IL17RDQ8NFM7 739 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 PFN4Q8NHR9 129 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 HIST1H2ACQ93077 130 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 SLC25A44Q96H78 314 aaPredicted RBP10.15□□□□□ -0.78
SRP54-203ENST00000553544 SEPHS2Q99611 448 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 FOXB1Q99853 325 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 ULBP2Q9BZM5 246 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 NOX3Q9HBY0 568 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 POFUT2Q9Y2G5 429 aa10.15□□□□□ -0.78
SRP54-203ENST00000553544 IGHV2OR16-5A0A0B4J2B6 119 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 BLOC1S5-TXNDC5H3BN57 136 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 GSTA4O15217 222 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 RNF13O43567 381 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 OR7A10O76100 309 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 HLA-HP01893 362 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 PGA4P0DJD7 388 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 PGA3P0DJD8 388 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 UMPSP11172 480 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 ANPEPP15144 967 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 EPHA1P21709 976 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 GPR6P46095 362 aaPredicted RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 GSK3BP49841 420 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 SLC7A2P52569 658 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 TMEM33P57088 247 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 MXRA7P84157 204 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 DEFA6Q01524 100 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 RPL18Q07020 188 aaKnown RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 ST3GAL3Q11203 375 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 MELKQ14680 651 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 AWAT1Q58HT5 328 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 CBLL1Q75N03 491 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 PIWIL3Q7Z3Z3 882 aaKnown RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 NANOGNBQ7Z5D8 188 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 VTCN1Q7Z7D3 282 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 OR51F2Q8NH61 342 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 CLDND2Q8NHS1 167 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 ZNF566Q969W8 418 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 SGTBQ96EQ0 304 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 TPD52L3Q96J77 140 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 PRRC1Q96M27 445 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 KCTD14Q9BQ13 255 aaPredicted RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 ZNF747Q9BV97 191 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 MRPL13Q9BYD1 178 aaKnown RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 DENND2DQ9H6A0 471 aaPredicted RBP10.14□□□□□ -0.79
SRP54-203ENST00000553544 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 MAN2C1Q9NTJ4 1040 aa10.14□□□□□ -0.79
SRP54-203ENST00000553544 FAM53CQ9NYF3 392 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms