RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 UBDO15205 165 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 FARS2O95363 451 aaKnown RBP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 MMP7P09237 267 aaPredicted RBP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 PGA4P0DJD7 388 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 PGA3P0DJD8 388 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 RBMXP38159 391 aaKnown RBP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF81P51508 661 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 MMP15P51511 669 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 NCALDP61601 193 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 MOGQ16653 247 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 KLF17Q5JT82 389 aaPredicted RBP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 GCNT6Q5T4J0 391 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 SLC16A14Q7RTX9 510 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 KRT73Q86Y46 540 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 LRRC17Q8N6Y2 441 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 DEFB108BQ8NET1 73 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 OR1J2Q8NGS2 313 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 OR1J1Q8NGS3 322 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 TAF15Q92804 592 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 ELMOD3Q96FG2 381 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF48Q96MX3 618 aaPredicted RBP18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 C1orf198Q9H425 327 aa18.33■□□□□ 0.52
SMARCD1-212ENST00000551966 PPIAL4EA0A075B759 164 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 PPIAL4CA0A0B4J2A2 164 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 DNAJC9-AS1A6NH13 148 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 PPIAL4DF5H284 164 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 SPRY3O43610 288 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 OR6A2O95222 327 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 CH25HO95992 272 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 PTHP01270 115 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 THY1P04216 161 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 PPIAL4FP0DN26 164 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 DRD4P21917 467 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 MPV17P39210 176 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF74Q16587 644 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 HIST3H3Q16695 136 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 SLC36A2Q495M3 483 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 LRIF1Q5T3J3 769 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 SWT1Q5T5J6 900 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 HHATQ5VTY9 493 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 RBMS3Q6XE24 437 aaKnown RBP18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 DPPA2Q7Z7J5 298 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 TREML1Q86YW5 311 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 GOLGA6L1Q8N7Z2 621 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 MCHR2Q969V1 340 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 UBAP1Q9NZ09 502 aa18.32■□□□□ 0.52
SMARCD1-212ENST00000551966 IQCMA0A1B0GVH7 501 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 TRAPPC2LH3BP13 241 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 ENTPD5O75356 428 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 LYPD3O95274 346 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 FAM209AQ5JX71 171 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 THEM4Q5T1C6 240 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 FUNDC1Q8IVP5 155 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF101Q8IZC7 436 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 LRRC18Q8N456 261 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 MREGQ8N565 214 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 ANKRD42Q8N9B4 389 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 RBM15BQ8NDT2 890 aaKnown RBP18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 MARS2Q96GW9 593 aaKnown RBP18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF347Q96SE7 839 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 MCHR1Q99705 422 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 LRMDAQ9H2I8 198 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 IKZF5Q9H5V7 419 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 DCAF16Q9NXF7 216 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 NUP50Q9UKX7 468 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 TRIM33Q9UPN9 1127 aa18.31■□□□□ 0.52
SMARCD1-212ENST00000551966 ISPDA4D126 451 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 PRORSD1PA6NEY8 169 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 ZSCAN5BA6NJL1 495 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 RNF13O43567 381 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 MT-ND5P03915 603 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 AQP1P29972 269 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 WNT5AP41221 380 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 PLP2Q04941 152 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 SCARB2Q14108 478 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 NPTX1Q15818 432 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 NRN1LQ496H8 165 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 SPATA46Q5T0L3 261 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 RANBP3LQ86VV4 465 aaPredicted RBP18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 POP5Q969H6 163 aaKnown RBP18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 MRPL13Q9BYD1 178 aaKnown RBP18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 VAPAQ9P0L0 249 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 KLHL21Q9UJP4 597 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 GMEB1Q9Y692 573 aa18.3■□□□□ 0.52
SMARCD1-212ENST00000551966 M0R3H8 397 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 CCNOP22674 350 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 BAMBIQ13145 260 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 PABPC1L2AQ5JQF8 200 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 PAGE3Q5JUK9 113 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 CEP85LQ5SZL2 805 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF613Q6PF04 617 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 ARMC8Q8IUR7 673 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 SMYD1Q8NB12 490 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 BHLHE22Q8NFJ8 381 aaPredicted RBP18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 ST7LQ8TDW4 575 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 IPCEF1Q8WWN9 437 aaPredicted RBP18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 POM121L2Q96KW2 1035 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 ZNF607Q96SK3 696 aa18.29■□□□□ 0.52
SMARCD1-212ENST00000551966 TMEM38AQ9H6F2 299 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms