RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 MMP28Q9H239 520 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GOLPH3Q9H4A6 298 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM185BQ9H7F4 350 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 POPDC3Q9HBV1 291 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 Q9N2J8 555 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 FBXO6Q9NRD1 293 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 UBQLN4Q9NRR5 601 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 B3GNT2Q9NY97 397 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TAS2R7Q9NYW3 318 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 GRHL1Q9NZI5 618 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 PAK5Q9P286 719 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ZMAT5Q9UDW3 170 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 BCAP29Q9UHQ4 241 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 MRTO4Q9UKD2 239 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 PSME2Q9UL46 239 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 C19orf53Q9UNZ5 99 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TRAPPC4Q9Y296 219 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SLC9A8Q9Y2E8 581 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 ACOT9Q9Y305 439 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 NOSIPQ9Y314 301 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 HYOU1Q9Y4L1 999 aa1.85□□□□□ -2.11
PTCH1-223ENST00000551623 SOX21Q9Y651 276 aaPredicted RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 DYNC2H1Q8NCM8 4307 aaKnown RBP1.85□□□□□ -2.11
PTCH1-223ENST00000551623 TET2Q6N021 2002 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PCNX3Q9H6A9 2034 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 TRBV5-7A0A0A0MS05 114 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CCDC189A1A4V9 331 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SH3PXD2BA1X283 911 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 NPIPB9F8W1W9 429 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 H0YHG0 523 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 UPK1AO00322 258 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SAP18O00422 153 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CCNT2O60583 730 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 EIF1BO60739 113 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RAMP3O60896 148 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ERAL1O75616 437 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RSL1D1O76021 490 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MFN2O95140 757 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SNAP29O95721 258 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 IGKV1D-16P01601 117 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV3-13P01766 116 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV4-59P01825 116 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 OPN1LWP04000 364 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 WNT2P09544 360 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ALDOCP09972 364 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ARSBP15848 533 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF14P17017 642 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CDH2P19022 906 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 UQCRC2P22695 453 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GABRA5P31644 462 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 TNFSF8P32971 234 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RPL4P36578 427 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CETN2P41208 172 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RAD52P43351 418 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ALDH3B1P43353 468 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MAGEB1P43366 347 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GLIPR1P48060 266 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PRIM2P49643 509 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RASSF2P50749 326 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MMP15P51511 669 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 P2RX1P51575 399 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CRIP2P52943 208 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RWDD2BP57060 319 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SEC61A1P61619 476 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CCL8P80075 99 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF117Q03924 483 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 COX10Q12887 443 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF155Q12901 538 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 THOC5Q13769 683 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 FRG1Q14331 258 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 FCN2Q15485 313 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 TSNQ15631 228 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 LTB4RQ15722 352 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 C18orf21Q32NC0 220 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GRAMD1BQ3KR37 738 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 KLHL26Q53HC5 615 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SYT14P1Q58G82 188 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 DMRTC1Q5HYR2 192 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 AVPI1Q5T686 147 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GPR157Q5UAW9 335 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 LIPJQ5W064 366 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 DHRS7BQ6IAN0 325 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SLC35E4Q6ICL7 350 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 FAM45BPQ6NSW5 357 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CYP20A1Q6UW02 462 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 C6orf89Q6UWU4 347 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 BTNL3Q6UXE8 466 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 BRD3OSQ6XYD6 125 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ADAMTSL5Q6ZMM2 481 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF367Q7RTV3 350 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PAGE2Q7Z2X7 111 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF101Q8IZC7 436 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 UBE2J2Q8N2K1 259 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CLIP4Q8N3C7 705 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 METTL4Q8N3J2 472 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SPICQ8N5J4 248 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF283Q8N7M2 679 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF614Q8N883 585 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms