RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ZNF347Q96SE7 839 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 ARHGDIGQ99819 225 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 EBF4Q9BQW3 602 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 TCF7L2Q9NQB0 619 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
TMEM106C-216ENST00000551305 M0QX08 132 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 SPRY3O43610 288 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 CHP2O43745 196 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 BCL10O95999 233 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 PPIBP23284 216 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 LIMS1P48059 325 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 TEKQ02763 1124 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 SLC36A2Q495M3 483 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 BPIFB2Q8N4F0 458 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 TEX29Q8N6K0 151 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 RBM15BQ8NDT2 890 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 CPEB3Q8NE35 698 aaKnown RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 OR1J1Q8NGS3 322 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 VANGL1Q8TAA9 524 aaPredicted RBP12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 CCL17Q92583 94 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 BCL2L14Q9BZR8 327 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 C7orf69Q9H7B7 122 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 NANSQ9NR45 359 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 PPIAL4AQ9Y536 164 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 PCDHGB1Q9Y5G3 927 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 GMEB1Q9Y692 573 aa12.58□□□□□ -0.4
TMEM106C-216ENST00000551305 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 IQCMA0A1B0GVH7 501 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 CLDN25C9JDP6 229 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 J3QLI3 93 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SNAP29O95721 258 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 DRD4P21917 467 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 CCNOP22674 350 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 IDH3AP50213 366 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 CLRN1P58418 232 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 LCN2P80188 198 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 HFEQ30201 348 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SPATA46Q5T0L3 261 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 PTOV1Q86YD1 416 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SYT14Q8NB59 555 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 CPPED1Q9BRF8 314 aaPredicted RBP12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 C1QTNF5Q9BXJ0 243 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 LRMDAQ9H2I8 198 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SAP30LQ9HAJ7 183 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 SLC7A7Q9UM01 511 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 TRIM33Q9UPN9 1127 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
TMEM106C-216ENST00000551305 EVPLLA8MZ36 301 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 BLOC1S5-TXNDC5H3BN57 136 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 FMO6PO60774 539 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 ENTPD5O75356 428 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 PRSS23O95084 383 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 PTHP01270 115 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 IGHV1-46P01743 117 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 IGHV3-13P01766 116 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 IGHG1P01857 330 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 HIST1H2ABP04908 130 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 F13BP05160 661 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 UMPSP11172 480 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 CDAP32320 146 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 APLNRP35414 380 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 MPV17P39210 176 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 ZNF81P51508 661 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 SLC18A1P54219 525 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 PCBP3P57721 371 aaKnown RBP12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 PLP2Q04941 152 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 SELPLGQ14242 412 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 HIST3H3Q16695 136 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 AGKQ53H12 422 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 RUNDC3AQ59EK9 446 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 HIST3H2AQ7L7L0 130 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 RAB1CQ92928 201 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 HIST1H2ACQ93077 130 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 C1orf198Q9H425 327 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 SLCO1B3Q9NPD5 702 aa12.56□□□□□ -0.4
TMEM106C-216ENST00000551305 UBAP1Q9NZ09 502 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms