RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 F13BP05160 661 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 AGTR1P30556 359 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 AKR1C2P52895 323 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ARF3P61204 181 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 PPIAP62937 165 aaKnown RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 AKR1C1Q04828 323 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 C2orf76Q3KRA6 126 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 PRRT3Q5FWE3 981 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ARHGAP40Q5TG30 622 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM184AQ6ZMB5 413 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 DPY19L4Q7Z388 723 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 C10orf53Q8N6V4 93 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 OR5M8Q8NGP6 311 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 CCL4L1Q8NHW4 92 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 CCDC107Q8WV48 283 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 FAM3DQ96BQ1 224 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 GPX7Q96SL4 187 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 WDR76Q9H967 626 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 OR10H2O60403 315 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CDC40O60508 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ATG12O94817 140 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RAB3DO95716 219 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CD8AP01732 235 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 LIPCP11150 499 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 FOSL1P15407 271 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 GJA4P35212 333 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 SLC25A1P53007 311 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 PRPS1P60891 318 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RUNX3Q13761 415 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 HOXB13Q92826 284 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 MOGAT1Q96PD6 335 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 LMF1Q96S06 567 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 AMELYQ99218 206 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 APOOQ9BUR5 198 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 A0A1B0GTI1 187 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM212A6NML5 194 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ALOX12BO75342 701 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CSTAP01040 98 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 AMY2AP04746 511 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CCKBRP32239 447 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 PSMD4P55036 377 aaKnown RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CTXN1P60606 82 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 DHRS2Q13268 280 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RAB30Q15771 203 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RAB11BQ15907 218 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 HFEQ30201 348 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ATPAF1Q5TC12 328 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 NPSR1Q6W5P4 371 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 RD3Q7Z3Z2 195 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 PUSL1Q8N0Z8 303 aaKnown RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 CA13Q8N1Q1 262 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 OR1S2Q8NGQ3 325 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 FAM3CQ92520 227 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 SEC22AQ96IW7 307 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 SPACA7Q96KW9 195 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 OR2M4Q96R27 311 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 KXD1Q9BQD3 176 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ADAT1Q9BUB4 502 aaKnown RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 POTEKPQ9BYX7 375 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 STARD5Q9NSY2 213 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 ACTR10Q9NZ32 417 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 LRIT1Q9P2V4 623 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 GPN3Q9UHW5 284 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-228ENST00000548938 PCDHB10Q9UN67 800 aa12.43□□□□□ -0.42
HDAC7-228ENST00000548938 PRSS38A1L453 326 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ELOA3DA6NLF2 546 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-228ENST00000548938 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 H7C2Y5 167 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 SLC31A1O15431 190 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 KCNJ13O60928 360 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 SLC25A12O75746 678 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 CD14P08571 375 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 S1PR1P21453 382 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 DLSTP36957 453 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ACTBP60709 375 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 B2MP61769 119 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ACTG1P63261 375 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 COL19A1Q14993 1142 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 TAF13Q15543 124 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ITPRIPL2Q3MIP1 535 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 ELOA3BQ3SY89 546 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 WDR38Q5JTN6 314 aa12.42□□□□□ -0.42
HDAC7-228ENST00000548938 GATSQ8NAP1 163 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms