RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 FBXL3Q9UKT7 428 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 ZNF281Q9Y2X9 895 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIAL4AQ9Y536 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 CORINQ9Y5Q5 1042 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 AKAP8O43823 692 aaKnown RBP11.53□□□□□ -0.56
CDX2-202ENST00000548877 UMPSP11172 480 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 MAGEB1P43366 347 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 CAPZA2P47755 286 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 IL13RA1P78552 427 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 GALK2Q01415 458 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 TEKQ02763 1124 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 LIPEQ05469 1076 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 LIN52Q52LA3 116 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 LRIF1Q5T3J3 769 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 LCN8Q6JVE9 175 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 ZNF836Q6ZNA1 936 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 CADM2Q8N3J6 435 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 OR52P1PQ8NH57 321 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 C1orf147Q96MC9 270 aaPredicted RBP11.53□□□□□ -0.56
CDX2-202ENST00000548877 C7orf69Q9H7B7 122 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 CMTM6Q9NX76 183 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 GPR160Q9UJ42 338 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 MAGEL2Q9UJ55 1249 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 CORO2BQ9UQ03 480 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 CHST2Q9Y4C5 530 aa11.53□□□□□ -0.56
CDX2-202ENST00000548877 TCRBV3S1A0A5B6 114 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 EVPLLA8MZ36 301 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 CLDN34H7C241 214 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 RFXANKO14593 260 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 OR2T1O43869 369 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 SEC14L2O76054 403 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 NR2F1P10589 423 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 CD79AP11912 226 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 PRG2P13727 222 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 ZNF250P15622 560 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 GSK3BP49841 420 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 RAB1AP62820 205 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 MS4A2Q01362 244 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 C5orf46Q6UWT4 87 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 VRK2Q86Y07 508 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 PQLC1Q8N2U9 271 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 RNF148Q8N7C7 305 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 HIPK4Q8NE63 616 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 SLC25A36Q96CQ1 311 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 KTI12Q96EK9 354 aaPredicted RBP11.52□□□□□ -0.57
CDX2-202ENST00000548877 SPATA9Q9BWV2 254 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 HINT3Q9NQE9 182 aaKnown RBP11.52□□□□□ -0.57
CDX2-202ENST00000548877 MED29Q9NX70 200 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 SEC14L4Q9UDX3 406 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 DUSP13Q9UII6 198 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 WIPI2Q9Y4P8 454 aa11.52□□□□□ -0.57
CDX2-202ENST00000548877 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 SLC22A23A1A5C7 686 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 DNAJC9-AS1A6NH13 148 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 UBL3O95164 117 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 SERPINA5P05154 406 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 FCGR1AP12314 374 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 GTF2E2P29084 291 aaKnown RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 RPS5P46782 204 aaKnown RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 GIPRP48546 466 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 MVKQ03426 396 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 PIGFQ07326 219 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 C1DQ13901 141 aaKnown RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 MFSD13AQ14CX5 517 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 RUNDC3AQ59EK9 446 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 COX20Q5RI15 118 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 AVPI1Q5T686 147 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 FAM69AQ5T7M9 428 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 RBMS3Q6XE24 437 aaKnown RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 ZNF813Q6ZN06 617 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 H1FNTQ75WM6 255 aaPredicted RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 ZNF584Q8IVC4 421 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 CLIP4Q8N3C7 705 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 TRIML2Q8N7C3 387 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 SLC41A3Q96GZ6 507 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 GPA33Q99795 319 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 VCXQ9H320 206 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 YY1AP1Q9H869 796 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 CALML5Q9NZT1 146 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 ZNF443Q9Y2A4 671 aaPredicted RBP11.51□□□□□ -0.57
CDX2-202ENST00000548877 AP4S1Q9Y587 144 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 WNK1Q9H4A3 2382 aa11.51□□□□□ -0.57
CDX2-202ENST00000548877 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 CLDN25C9JDP6 229 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 MS4A18H0YCH9 400 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 M0R082 166 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 M0R3G1 203 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 CASQ2O14958 399 aaPredicted RBP11.5□□□□□ -0.57
CDX2-202ENST00000548877 GSTA4O15217 222 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 CDC14BO60729 498 aa11.5□□□□□ -0.57
CDX2-202ENST00000548877 RAB36O95755 333 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms