RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 LINC00114Q6XXX2 140 aa17.02■□□□□ 0.32
GATC-202ENST00000548171 SLC16A14Q7RTX9 510 aa17.02■□□□□ 0.32
GATC-202ENST00000548171 CPEB3Q8NE35 698 aaKnown RBP17.02■□□□□ 0.32
GATC-202ENST00000548171 OR4K5Q8NGD3 323 aa17.02■□□□□ 0.32
GATC-202ENST00000548171 DVL3Q92997 716 aaPredicted RBP17.02■□□□□ 0.32
GATC-202ENST00000548171 RNF13O43567 381 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 QDPRP09417 244 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 PGA4P0DJD7 388 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 PGA3P0DJD8 388 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 ZNF81P51508 661 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 CEP85LQ5SZL2 805 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 ARMC8Q8IUR7 673 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 ICA1LQ8NDH6 482 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 RBM15BQ8NDT2 890 aaKnown RBP17.01■□□□□ 0.31
GATC-202ENST00000548171 C22orf15Q8WYQ4 148 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 OR52B2Q96RD2 323 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 TMEM38AQ9H6F2 299 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 SLCO1B3Q9NPD5 702 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 TAS2R5Q9NYW4 299 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 CORO2BQ9UQ03 480 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 PPIAL4AQ9Y536 164 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 CACNG2Q9Y698 323 aa17.01■□□□□ 0.31
GATC-202ENST00000548171 TGP01266 2768 aa17■□□□□ 0.31
GATC-202ENST00000548171 PLSCR5A0PG75 271 aa17■□□□□ 0.31
GATC-202ENST00000548171 CHP2O43745 196 aa17■□□□□ 0.31
GATC-202ENST00000548171 IGHG1P01857 330 aa17■□□□□ 0.31
GATC-202ENST00000548171 APLNRP35414 380 aa17■□□□□ 0.31
GATC-202ENST00000548171 WDR4P57081 412 aaKnown RBP17■□□□□ 0.31
GATC-202ENST00000548171 SCARB2Q14108 478 aa17■□□□□ 0.31
GATC-202ENST00000548171 ZNF74Q16587 644 aa17■□□□□ 0.31
GATC-202ENST00000548171 TUSC1Q2TAM9 212 aa17■□□□□ 0.31
GATC-202ENST00000548171 UNQ6126/PRO20091Q6UXV3 157 aa17■□□□□ 0.31
GATC-202ENST00000548171 DOK3Q7L591 496 aa17■□□□□ 0.31
GATC-202ENST00000548171 CROCCP2Q86T23 111 aa17■□□□□ 0.31
GATC-202ENST00000548171 MSRB3Q8IXL7 192 aa17■□□□□ 0.31
GATC-202ENST00000548171 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
GATC-202ENST00000548171 OR1J1Q8NGS3 322 aa17■□□□□ 0.31
GATC-202ENST00000548171 ST7LQ8TDW4 575 aa17■□□□□ 0.31
GATC-202ENST00000548171 CCL17Q92583 94 aa17■□□□□ 0.31
GATC-202ENST00000548171 POP5Q969H6 163 aaKnown RBP17■□□□□ 0.31
GATC-202ENST00000548171 GPA33Q99795 319 aa17■□□□□ 0.31
GATC-202ENST00000548171 EGLN1Q9GZT9 426 aa17■□□□□ 0.31
GATC-202ENST00000548171 NANSQ9NR45 359 aa17■□□□□ 0.31
GATC-202ENST00000548171 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
GATC-202ENST00000548171 ZNF500O60304 480 aaPredicted RBP16.99■□□□□ 0.31
GATC-202ENST00000548171 FOXH1O75593 365 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 IGHV1-46P01743 117 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 PRTN3P24158 256 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 GCH1P30793 250 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 MRPL19P49406 292 aaKnown RBP16.99■□□□□ 0.31
GATC-202ENST00000548171 ATP4BP51164 291 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 ZNF84P51523 738 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 STX1BP61266 288 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 LCN2P80188 198 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 GLO1Q04760 184 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 HIST3H3Q16695 136 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 PDLIM3Q53GG5 364 aaPredicted RBP16.99■□□□□ 0.31
GATC-202ENST00000548171 MAVSQ7Z434 540 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 C10orf111Q8N326 155 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 GTF3AQ92664 365 aaKnown RBP16.99■□□□□ 0.31
GATC-202ENST00000548171 MCHR1Q99705 422 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 WFDC6Q9BQY6 131 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 CYSLTR2Q9NS75 346 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 ZNF229Q9UJW7 825 aa16.99■□□□□ 0.31
GATC-202ENST00000548171 ISPDA4D126 451 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 CENPBD1B2RD01 187 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 UBOX5O94941 541 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 CH25HO95992 272 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 HIST1H2ABP04908 130 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 ADH4P08319 380 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 MMP7P09237 267 aaPredicted RBP16.98■□□□□ 0.31
GATC-202ENST00000548171 GPX2P18283 190 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 MAKP20794 623 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 AQP1P29972 269 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 LIPAP38571 399 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 MMP15P51511 669 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 CLRN1P58418 232 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 HSF2Q03933 536 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 ZNF718Q3SXZ3 478 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 TTC33Q6PID6 262 aaPredicted RBP16.98■□□□□ 0.31
GATC-202ENST00000548171 HIST3H2AQ7L7L0 130 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 C1orf174Q8IYL3 243 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 SIGLECL1Q8N7X8 197 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 HIPK4Q8NE63 616 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 HIST1H2ACQ93077 130 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 LRRC58Q96CX6 371 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
GATC-202ENST00000548171 ARHGDIGQ99819 225 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 SLC19A3Q9BZV2 496 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 KCNN2Q9H2S1 579 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 VAPAQ9P0L0 249 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 CGGBP1Q9UFW8 167 aaPredicted RBP16.98■□□□□ 0.31
GATC-202ENST00000548171 ANGPT4Q9Y264 503 aa16.98■□□□□ 0.31
GATC-202ENST00000548171 TMEM120BA0PK00 339 aa16.97■□□□□ 0.31
GATC-202ENST00000548171 EVPLLA8MZ36 301 aa16.97■□□□□ 0.31
GATC-202ENST00000548171 SPRY3O43610 288 aa16.97■□□□□ 0.31
GATC-202ENST00000548171 VIMP08670 466 aaKnown RBP16.97■□□□□ 0.31
GATC-202ENST00000548171 STOMP27105 288 aa16.97■□□□□ 0.31
GATC-202ENST00000548171 MELKQ14680 651 aa16.97■□□□□ 0.31
GATC-202ENST00000548171 ARMCX4Q5H9R4 360 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms