RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 BPGMP07738 259 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 LBPP18428 481 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 HTR2AP28223 471 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 MMP15P51511 669 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 RAG2P55895 527 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 BIDP55957 195 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 SEC61A1P61619 476 aaKnown RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 FBLN7Q53RD9 439 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 ALG10BQ5I7T1 473 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 OLFML2AQ68BL7 652 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 WDR88Q6ZMY6 472 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 PXKQ7Z7A4 578 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 DPPA2Q7Z7J5 298 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 JAZF1Q86VZ6 243 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 C1QL4Q86Z23 238 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 SPICQ8N5J4 248 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 LSMEM1Q8N8F7 131 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 OR52E2Q8NGJ4 325 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 DNAJA4Q8WW22 397 aaPredicted RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 TMEM54Q969K7 222 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 DIRC2Q96SL1 478 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 EPYCQ99645 322 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 LRMDAQ9H2I8 198 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 SLC6A13Q9NSD5 602 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 TMEM38BQ9NVV0 291 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 MRPL39Q9NYK5 338 aaKnown RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 GLTPQ9NZD2 209 aa11.35□□□□□ -0.59
CCDC59-202ENST00000547758 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
CCDC59-202ENST00000547758 IQCMA0A1B0GVH7 501 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 MDFIC2A0A1B0GVS7 189 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 TMEM247A6NEH6 219 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 ZSCAN5BA6NJL1 495 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 PLPP3O14495 311 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 RFXANKO14593 260 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 HOXA3O43365 443 aaPredicted RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 ITM2AO43736 263 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 SBK2P0C263 348 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 AHCYP23526 432 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 IL12AP29459 219 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 SLC6A9P48067 706 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 HNRNPA0Q13151 305 aaKnown RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 SLC36A2Q495M3 483 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 SLC16A14Q7RTX9 510 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 KLHL36Q8N4N3 616 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 OR4K5Q8NGD3 323 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 IPCEF1Q8WWN9 437 aaPredicted RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 GEMIN6Q8WXD5 167 aaKnown RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 MOGAT1Q96PD6 335 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 DCLRE1CQ96SD1 692 aaKnown RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 RBM4BQ9BQ04 359 aaKnown RBP11.34□□□□□ -0.59
CCDC59-202ENST00000547758 DCAF16Q9NXF7 216 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
CCDC59-202ENST00000547758 TLDC2A0PJX2 215 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 LRRN3E7EW58 273 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 PLATP00750 562 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 CRYBA1P05813 215 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 ADH4P08319 380 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 ALDOCP09972 364 aaKnown RBP11.33□□□□□ -0.6
CCDC59-202ENST00000547758 APLNRP35414 380 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 MPV17P39210 176 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 PLP2Q04941 152 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 PAX8Q06710 450 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 ZNF718Q3SXZ3 478 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 TMEM155Q4W5P6 130 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 SPRNQ5BIV9 151 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 SPATA46Q5T0L3 261 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 FAM91A1Q658Y4 838 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 ULK3Q6PHR2 472 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 LRFN4Q6PJG9 635 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 RBM15BQ8NDT2 890 aaKnown RBP11.33□□□□□ -0.6
CCDC59-202ENST00000547758 BHLHE22Q8NFJ8 381 aaPredicted RBP11.33□□□□□ -0.6
CCDC59-202ENST00000547758 OR6X1Q8NH79 312 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 SLC47A1Q96FL8 570 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 CYSLTR2Q9NS75 346 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
CCDC59-202ENST00000547758 OR5V1Q9UGF6 321 aa11.33□□□□□ -0.6
CCDC59-202ENST00000547758 TRAV40A0A0B4J280 105 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 CLPSL1A2RUU4 121 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 C11orf98E9PRG8 122 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 F5H0A9 414 aaPredicted RBP11.32□□□□□ -0.6
CCDC59-202ENST00000547758 DHHO43323 396 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 NDUFA7O95182 113 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 NGFP01138 241 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 CD55P08174 381 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 PPIAL4GP0DN37 164 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 CCNOP22674 350 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 CD80P33681 288 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 RELBQ01201 579 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 ESCO2Q56NI9 601 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 THEM4Q5T1C6 240 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 ASPHD2Q6ICH7 369 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 OGFOD2Q6N063 350 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 FIP1L1Q6UN15 594 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms