RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZFC3H1O60293 1989 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 D6RAR5 112 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 PRAMEF26H0Y7S4 382 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 SGK494L7N484 410 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 CLDN5O00501 218 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ZNF780AO75290 641 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 NEBLO76041 1014 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 SNAPINO95295 136 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ADRB3P13945 408 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 H2AFXP16104 143 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ANXA13P27216 316 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ATP5C1P36542 298 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 CCT6AP40227 531 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 PRPS1P60891 318 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 FZD2Q14332 565 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 CST6Q15828 149 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 RABGAP1LQ5R372 815 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 GPR157Q5UAW9 335 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 OR52W1Q6IF63 320 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 BLOC1S2Q6QNY1 142 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 EFL1Q7Z2Z2 1120 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 VRK2Q86Y07 508 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 WFDC5Q8TCV5 224 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 PHF10Q8WUB8 498 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 UCN3Q969E3 161 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 EEF2KMTQ96G04 330 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 OR2M2Q96R28 347 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 DDX19AQ9NUU7 478 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 C6orf203Q9P0P8 240 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 MTRF1LQ9UGC7 380 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 XPO7Q9UIA9 1087 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 LSM7Q9UK45 103 aaKnown RBP2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ODF2LQ9ULJ1 636 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ERVW-1Q9UQF0 538 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ATRQ13535 2644 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 PLXNA2O75051 1894 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 SCN8AQ9UQD0 1980 aa2.43□□□□□ -2.02
SNHG1-224ENST00000545688 ANK2Q01484 3957 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 DIDO1Q9BTC0 2240 aaKnown RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 SPTY2D1-AS1A0A0U1RR47 76 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 FAM47DPA6NHR8 397 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 PP2D1A8MPX8 630 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 H0YCG3 227 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 JAK2O60674 1132 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 PFKFB2O60825 505 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 CENPBP07199 599 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 GSTT2P0CG29 244 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 GSTT2BP0CG30 244 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 ALPPL2P10696 532 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 CD70P32970 193 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 PRPHP41219 470 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 MTTPP55157 894 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 ARFRP1Q13795 201 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 FAM71E1Q6IPT2 247 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 NEK5Q6P3R8 708 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 RUFY3Q7L099 469 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 ZNF720Q7Z2F6 126 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 MMAAQ8IVH4 418 aaKnown RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 CNTN4Q8IWV2 1026 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 CSGALNACT2Q8N6G5 542 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 OR5B17Q8NGF7 314 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 ERMNQ8TAM6 284 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 SLC22A8Q8TCC7 542 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 TMEM158Q8WZ71 300 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 NAT6Q93015 286 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 TMEM159Q96B96 161 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 HPDLQ96IR7 371 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 KLF6Q99612 283 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 WRAP53Q9BUR4 548 aaKnown RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 SLC25A51Q9H1U9 297 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 FBXO44Q9H4M3 255 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 C1orf123Q9NWV4 160 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 RBAKQ9NYW8 714 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 APPL1Q9UKG1 709 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 TDRKHQ9Y2W6 561 aaKnown RBP2.42□□□□□ -2.02
SNHG1-224ENST00000545688 PLLPQ9Y342 182 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 KIF3AQ9Y496 699 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 UGT2A1Q9Y4X1 527 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 UNC13CQ8NB66 2214 aa2.42□□□□□ -2.02
SNHG1-224ENST00000545688 TRBV2A0A0J9YWF9 115 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 A0A1W2PRQ8 180 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 HEATR9A2RTY3 570 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 CPLX1O14810 134 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 RAD51BO15315 384 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 AQP9O43315 295 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 DUX1O43812 170 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 IGLV3-27P01718 113 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 COX7A1P24310 79 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 PSMA5P28066 241 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 OAS2P29728 719 aaKnown RBP2.41□□□□□ -2.02
SNHG1-224ENST00000545688 PRDX2P32119 198 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 PLK1P53350 603 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 TFAMQ00059 246 aaKnown RBP2.41□□□□□ -2.02
SNHG1-224ENST00000545688 WASHC5Q12768 1159 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 CDC20Q12834 499 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 DEFB133Q30KQ1 61 aa2.41□□□□□ -2.02
SNHG1-224ENST00000545688 CASC10Q5T4H9 136 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms